Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66188571 . C A CCDS9775.1:NM_178155.2:c.914cCc>cAc_NP_835368.1:p.305P>H Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 PRO A:265 A:305 1.0 0.007 T -63.7 155.2 1.0 0.007 0.0 EDO
HOH
 8.563
3.350
 O
CA
 O2
O
PRO B:265 B:305 1.0 0.007 T -64.3 158.0 NA NA NA
PRO C:265 C:305 2.0 0.014 T -64.4 156.4 NA NA NA
PRO D:265 D:305 1.0 0.007 T -62.5 157.8 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 PRO A:265 A:305 1.0 0.007 T -65.6 158.6 NA NA NA
PRO B:265 B:305 2.0 0.014 T -65.3 157.2 2.0 0.014 0.0 NAG
MAN
NAG
HOH
 9.418
8.770
7.203
3.369
 CD
O
O
O
 C8
O2
O3
O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 PRO A:265 A:305 3.0 0.021 T -64.1 155.4 3.0 0.021 0.0 NAG
HOH
 9.841
3.727
 CD
CA
 C8
O
PRO B:265 B:305 2.0 0.014 T -62.8 156.3 2.0 0.014 0.0 HOH
 3.471
 C
 O
PRO C:265 C:305 5.0 0.034 T -63.5 156.2 NA NA NA
PRO D:265 D:305 4.0 0.028 T -63.1 156.6 NA NA NA
PRO E:265 E:305 2.0 0.014 T -63.7 156.1 NA NA NA
PRO F:265 F:305 3.0 0.021 T -63.6 156.9 NA NA NA
PRO G:265 G:305 3.0 0.021 T -62.9 156.1 NA NA NA
PRO H:265 H:305 3.0 0.021 T -63.6 156.2 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 PRO A:265 A:305 3.0 0.021 T -68.3 154.9 3.0 0.021 0.0 NAG
MAN
 9.979
9.101
 CG
O
 C8
O2
PRO B:265 B:305 3.0 0.021 T -68.6 154.1 3.0 0.021 0.0 NAG
MAN
HOH
 9.979
7.556
9.848
 CD
O
CD
 C8
O2
O
PRO C:265 C:305 2.0 0.014 T -68.8 154.3 NA NA NA
PRO D:265 D:305 3.0 0.021 T -68.8 154.6 NA NA NA
PRO E:265 E:305 2.0 0.014 T -67.7 154.8 NA NA NA
PRO F:265 F:305 5.0 0.034 T -67.7 155.1 NA NA NA
PRO G:265 G:305 2.0 0.014 T -68.4 154.7 NA NA NA
PRO H:265 H:305 3.0 0.021 T -69.5 154.4 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 PRO A:243 X:305 3.0 0.021 T -55.7 151.8 3.0 0.021 0.0 HOH
 3.543
 CA
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 PRO A:273 A:305 2.0 0.014 T -58.9 155.7 2.0 0.014 0.0 HOH
 3.381
 O
 O
PRO B:273 B:305 2.0 0.014 T -60.5 154.6 2.0 0.014 0.0 HOH
 3.350
 O
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 PRO A:273 A:305 1.0 0.007 T -57.5 152.4 NA NA NA
PRO B:273 B:305 1.0 0.007 T -59.2 156.2 NA NA NA
PRO C:273 C:305 1.0 0.007 T -57.9 157.5 1.0 0.007 0.0 HOH
 3.362
 CB
 O
PRO D:273 D:305 2.0 0.014 T -58.5 152.8 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 PRO A:201 A:305 4.0 0.028 T -58.3 156.4 4.0 0.028 0.0 NAG
MAN
NAG
HOH
 9.888
8.926
7.261
3.383
 CD
O
O
CA
 C8
O5
O3
O
PRO B:201 B:305 1.0 0.007 T -60.1 154.9 NA NA NA
PRO C:201 G:305 2.0 0.014 T -57.8 156.4 NA NA NA
PRO D:201 H:305 3.0 0.021 T -57.7 155.8 3.0 0.021 0.0 NAG
MAN
NAG
HOH
 9.732
8.983
7.422
3.303
 CD
O
O
O
 C8
O2
O7
O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 PRO A:201 A:305 3.0 0.021 T -57.6 154.4 3.0 0.021 0.0 HOH
 3.371
 CA
 O
PRO B:201 B:305 1.0 0.007 T -57.8 155.5 1.0 0.007 0.0 HOH
 3.074
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 PRO A:199 A:305 1.0 0.007 T -58.4 153.8 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 PRO A:198 A:305 1.0 0.007 T -70.2 156.7 1.0 0.007 0.0 MAN
NAG
 8.812
7.260
 O
O
 O2
O3
PRO B:198 B:305 3.0 0.021 T -71.3 156.5 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 PRO B:198 B:305 2.0 0.014 T -59.5 154.5 2.0 0.014 0.0 NAG
MAN
NAG
HOH
 9.737
8.625
7.666
3.379
 CD
O
O
CA
 C8
O2
O7
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 PRO A:305 A:305 2.0 0.014 T -56.5 153.8