Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66188579 . G A CCDS9775.1:NM_178155.2:c.922Gta>Ata_NP_835368.1:p.308V>I Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:268 A:308 1.0 0.006 E -127.3 153.0 1.0 0.006 0.0 HOH
 3.995
 N
 O
VAL B:268 B:308 1.0 0.006 E -126.2 163.4 NA NA NA
VAL C:268 C:308 1.0 0.006 E -138.2 147.7 NA NA NA
VAL D:268 D:308 2.0 0.013 E -133.2 149.9 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:268 A:308 1.0 0.006 E -120.7 160.5 NA NA NA
VAL B:268 B:308 1.0 0.006 E -119.9 159.9 1.0 0.006 0.0 HOH
 4.061
 N
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:268 A:308 1.0 0.006 E -132.9 157.1 1.0 0.006 0.0 HOH
 4.263
 CG1
 O
VAL B:268 B:308 3.0 0.019 E -132.7 156.9 3.0 0.019 0.0 HOH
 3.785
 N
 O
VAL C:268 C:308 1.0 0.006 E -133.2 156.0 NA NA NA
VAL D:268 D:308 1.0 0.006 E -132.6 157.9 NA NA NA
VAL E:268 E:308 2.0 0.013 E -132.7 157.8 NA NA NA
VAL F:268 F:308 1.0 0.006 E -132.5 156.9 NA NA NA
VAL G:268 G:308 2.0 0.013 E -131.9 157.6 NA NA NA
VAL H:268 H:308 1.0 0.006 E -133.0 157.4 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:268 A:308 1.0 0.006 E -119.4 160.5 1.0 0.006 0.0 HOH
 6.959
 C
 O
VAL B:268 B:308 1.0 0.006 E -119.9 160.5 1.0 0.006 0.0
VAL C:268 C:308 1.0 0.006 E -119.5 160.4 NA NA NA
VAL D:268 D:308 1.0 0.006 E -120.3 161.2 NA NA NA
VAL E:268 E:308 1.0 0.006 E -119.2 160.8 NA NA NA
VAL F:268 F:308 1.0 0.006 E -118.9 161.0 NA NA NA
VAL G:268 G:308 6.0 0.039 E -119.9 161.2 NA NA NA
VAL H:268 H:308 2.0 0.013 E -120.0 162.4 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 VAL A:246 X:308 1.0 0.006 E -147.4 149.3 1.0 0.006 0.0 HOH
 3.931
 CG2
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 VAL A:276 A:308 0.0 0.0 E -128.1 158.0 0.0 0.0 0.0 HOH
 4.151
 N
 O
VAL B:276 B:308 0.0 0.0 E -126.8 158.3 0.0 0.0 0.0 HOH
 4.220
 N
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 VAL A:276 A:308 0.0 0.0 E -120.6 158.3 NA NA NA
VAL B:276 B:308 3.0 0.019 E -117.8 159.9 NA NA NA
VAL C:276 C:308 1.0 0.006 E -127.0 161.9 1.0 0.006 0.0 HOH
 4.052
 N
 O
VAL D:276 D:308 1.0 0.006 E -128.1 151.1 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 VAL A:204 A:308 1.0 0.006 E -123.8 163.2 1.0 0.006 0.0 HOH
 3.991
 N
 O
VAL B:204 B:308 1.0 0.006 E -117.4 158.8 NA NA NA
VAL C:204 G:308 1.0 0.006 E -108.1 161.8 NA NA NA
VAL D:204 H:308 1.0 0.006 E -116.0 160.0 1.0 0.006 0.0 HOH
 4.167
 N
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 VAL A:204 A:308 1.0 0.006 E -121.3 158.3 1.0 0.006 0.0 HOH
 4.204
 N
 O
VAL B:204 B:308 1.0 0.006 E -120.0 158.6 1.0 0.006 0.0 HOH
 4.134
 N
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 VAL A:202 A:308 0.0 0.0 E -133.6 155.2 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 VAL A:201 A:308 1.0 0.006 E -105.6 162.8 1.0 0.006 0.0 CL
 8.034
 O
 CL
VAL B:201 B:308 1.0 0.006 E -105.6 159.5 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 VAL B:201 B:308 1.0 0.006 E -126.8 153.2 1.0 0.006 0.0 HOH
 4.096
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 VAL A:308 A:308 1.0 0.006 E -114.2 160.7