Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66188594 . G A CCDS9775.1:NM_178155.2:c.937Gca>Aca_NP_835368.1:p.313A>T Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:273 A:313 11.0 0.096 H -60.2 -48.7 11.0 0.096 0.0 HOH
 3.256
 N
 O
ALA B:273 B:313 11.0 0.096 H -61.7 -48.3 NA NA NA
ALA C:273 C:313 11.0 0.096 H -61.6 -49.3 NA NA NA
ALA D:273 D:313 9.0 0.078 H -60.1 -48.6 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:273 A:313 10.0 0.087 H -60.5 -43.5 NA NA NA
ALA B:273 B:313 11.0 0.096 H -62.7 -43.9 11.0 0.096 0.0 HOH
 3.017
 N
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:273 A:313 13.0 0.113 H -57.4 -54.0 13.0 0.113 0.0 HOH
 3.243
 N
 O
ALA B:273 B:313 11.0 0.096 H -58.3 -52.7 10.0 0.087 0.009 A:Q9BYC5:0.009
 HOH
 7.328
 N
 O
ALA C:273 C:313 8.0 0.07 H -58.7 -54.5 NA NA NA
ALA D:273 D:313 8.0 0.07 H -57.7 -53.1 NA NA NA
ALA E:273 E:313 13.0 0.113 H -57.4 -53.8 NA NA NA
ALA F:273 F:313 11.0 0.096 H -58.1 -54.4 NA NA NA
ALA G:273 G:313 10.0 0.087 H -57.3 -53.0 NA NA NA
ALA H:273 H:313 10.0 0.087 H -57.4 -50.7 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:273 A:313 13.0 0.113 H -61.8 -48.8 13.0 0.113 0.0 HOH
 8.158
 N
 O
ALA B:273 B:313 16.0 0.139 H -61.8 -48.0 16.0 0.139 0.0
ALA C:273 C:313 12.0 0.104 H -60.9 -47.9 NA NA NA
ALA D:273 D:313 14.0 0.122 H -61.2 -47.8 NA NA NA
ALA E:273 E:313 13.0 0.113 H -61.1 -48.1 NA NA NA
ALA F:273 F:313 14.0 0.122 H -60.6 -48.7 NA NA NA
ALA G:273 G:313 14.0 0.122 H -61.9 -48.9 NA NA NA
ALA H:273 H:313 10.0 0.087 H -61.4 -48.9 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ALA A:251 X:313 20.0 0.174 H -72.7 -55.8 20.0 0.174 0.0 HOH
 3.474
 N
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ALA A:281 A:313 11.0 0.096 H -60.3 -45.4 11.0 0.096 0.0 HOH
 3.401
 N
 O
ALA B:281 B:313 10.0 0.087 H -61.4 -45.1 10.0 0.087 0.0 HOH
 3.499
 N
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ALA A:281 A:313 15.0 0.13 H -59.5 -47.4 NA NA NA
ALA B:281 B:313 13.0 0.113 H -60.3 -42.2 NA NA NA
ALA C:281 C:313 9.0 0.078 H -61.9 -42.7 9.0 0.078 0.0 HOH
 3.267
 N
 O
ALA D:281 D:313 13.0 0.113 H -54.4 -51.8 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ALA A:209 A:313 12.0 0.104 H -65.7 -45.1 12.0 0.104 0.0 HOH
 3.313
 N
 O
ALA B:209 B:313 6.0 0.052 H -61.8 -53.1 NA NA NA
ALA C:209 G:313 12.0 0.104 H -62.6 -50.1 NA NA NA
ALA D:209 H:313 11.0 0.096 H -63.8 -44.6 11.0 0.096 0.0 HOH
 3.420
 N
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ALA A:209 A:313 14.0 0.122 H -64.5 -40.9 14.0 0.122 0.0 HOH
 3.343
 N
 O
ALA B:209 B:313 14.0 0.122 H -64.3 -45.5 14.0 0.122 0.0 HOH
 3.456
 N
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ALA A:207 A:313 12.0 0.104 H -56.7 -47.4 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:206 A:313 11.0 0.096 H -62.5 -45.5 11.0 0.096 0.0
ALA B:206 B:313 10.0 0.087 H -64.8 -43.8 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ALA B:206 B:313 8.0 0.07 H -55.1 -45.2 8.0 0.07 0.0 GOL
GOL
HOH
 8.583
9.904
3.397
 O
O
N
 C1
C3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ALA A:313 A:313 8.0 0.07 H -52.5 -51.4