Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66188600 . C A CCDS9775.1:NM_178155.2:c.943Cga>Aga_NP_835368.1:p.315R>R Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:275 A:315 76.0 0.338 H -61.0 -39.9 76.0 0.338 0.0 HOH
 2.910
 O
 O
ARG B:275 B:315 80.0 0.356 H -62.9 -40.3 NA NA NA
ARG C:275 C:315 76.0 0.338 H -62.0 -38.1 NA NA NA
ARG D:275 D:315 79.0 0.351 H -62.7 -38.6 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:275 A:315 78.0 0.347 H -69.8 -33.4 NA NA NA
ARG B:275 B:315 77.0 0.342 H -69.4 -36.8 77.0 0.342 0.0 HOH
 2.881
 NH1
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:275 A:315 82.0 0.364 H -71.1 -34.5 82.0 0.364 0.0 HOH
 5.202
 N
 O
ARG B:275 B:315 71.0 0.316 H -71.1 -32.8 71.0 0.316 0.0 HOH
 3.235
 NH1
 O
ARG C:275 C:315 81.0 0.36 H -70.1 -33.0 NA NA NA
ARG D:275 D:315 79.0 0.351 H -70.3 -34.2 NA NA NA
ARG E:275 E:315 77.0 0.342 H -70.4 -33.3 NA NA NA
ARG F:275 F:315 78.0 0.347 H -70.2 -33.2 NA NA NA
ARG G:275 G:315 73.0 0.324 H -70.0 -33.7 NA NA NA
ARG H:275 H:315 80.0 0.356 H -71.3 -33.1 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:275 A:315 80.0 0.356 H -64.8 -37.4 80.0 0.356 0.0 HOH
 7.795
 O
 O
ARG B:275 B:315 100.0 0.444 H -65.9 -35.2 100.0 0.444 0.0
ARG C:275 C:315 86.0 0.382 H -66.2 -37.6 NA NA NA
ARG D:275 D:315 82.0 0.364 H -65.6 -36.2 NA NA NA
ARG E:275 E:315 84.0 0.373 H -67.3 -36.0 NA NA NA
ARG F:275 F:315 79.0 0.351 H -65.3 -36.7 NA NA NA
ARG G:275 G:315 75.0 0.333 H -65.4 -37.6 NA NA NA
ARG H:275 H:315 81.0 0.36 H -65.3 -36.7 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ARG A:253 X:315 73.0 0.324 H -53.4 -42.3 73.0 0.324 0.0 HOH
 2.949
 N
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ARG A:283 A:315 80.0 0.356 H -66.5 -36.9 80.0 0.356 0.0 EDO
HOH
 8.741
2.659
 N
NH1
 O1
O
ARG B:283 B:315 81.0 0.36 H -62.3 -38.0 81.0 0.36 0.0 HOH
 2.762
 NH1
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ARG A:283 A:315 74.0 0.329 H -60.5 -32.6 NA NA NA
ARG B:283 B:315 67.0 0.298 H -66.7 -30.2 NA NA NA
ARG C:283 C:315 73.0 0.324 H -64.8 -32.6 73.0 0.324 0.0 HOH
 2.891
 NH1
 O
ARG D:283 D:315 79.0 0.351 H -58.2 -34.9 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ARG A:211 A:315 74.0 0.329 H -71.1 -30.8 74.0 0.329 0.0 HOH
 2.605
 NH1
 O
ARG B:211 B:315 79.0 0.351 H -76.0 -32.8 NA NA NA
ARG C:211 G:315 79.0 0.351 H -74.4 -32.0 NA NA NA
ARG D:211 H:315 76.0 0.338 H -66.3 -33.5 76.0 0.338 0.0 HOH
 2.868
 O
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ARG A:211 A:315 79.0 0.351 H -66.6 -30.1 79.0 0.351 0.0 HOH
 2.843
 NH1
 O
ARG B:211 B:315 84.0 0.373 H -72.2 -30.6 84.0 0.373 0.0 HOH
 2.790
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ARG A:209 A:315 71.0 0.316 H -66.2 -38.8 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:208 A:315 78.0 0.347 H -63.9 -38.0 78.0 0.347 0.0 CL
HOH
 9.363
7.900
 N
O
 CL
O
ARG B:208 B:315 77.0 0.342 H -64.1 -39.1 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ARG B:208 B:315 69.0 0.307 H -65.5 -39.6 69.0 0.307 0.0 GOL
HOH
 8.307
2.727
 N
O
 C3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ARG A:315 A:315 73.0 0.324 H -72.8 -44.0