Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66188609 . C A CCDS9775.1:NM_178155.2:c.952Cga>Aga_NP_835368.1:p.318R>R Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:278 A:318 154.0 0.684 H -64.4 -41.9 68.0 0.302 0.382 D:Q9BYC5:0.382
 HOH
 2.586
 O
 O
ARG B:278 B:318 162.0 0.72 H -65.1 -40.8 NA NA NA
ARG C:278 C:318 155.0 0.689 H -65.6 -27.2 NA NA NA
ARG D:278 D:318 161.0 0.716 H -65.7 -27.6 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:278 A:318 157.0 0.698 H -63.9 -29.5 NA NA NA
ARG B:278 B:318 155.0 0.689 H -63.6 -31.0 68.0 0.302 0.387 A:Q9BYC5:0.387
 HOH
 2.652
 O
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:278 A:318 169.0 0.751 H -64.2 -30.6 67.0 0.298 0.453 B:Q9BYC5:0.453
 HOH
 4.883
 NH1
 O
ARG B:278 B:318 157.0 0.698 H -64.3 -30.4 68.0 0.302 0.396 A:Q9BYC5:0.396
 HOH
 4.453
 O
 O
ARG C:278 C:318 162.0 0.72 H -63.1 -32.6 NA NA NA
ARG D:278 D:318 159.0 0.707 H -64.3 -32.5 NA NA NA
ARG E:278 E:318 154.0 0.684 H -64.4 -32.3 NA NA NA
ARG F:278 F:318 154.0 0.684 H -63.6 -31.5 NA NA NA
ARG G:278 G:318 149.0 0.662 H -65.8 -31.2 NA NA NA
ARG H:278 H:318 163.0 0.724 H -63.3 -31.7 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:278 A:318 185.0 0.822 H -57.3 -27.5 106.0 0.471 0.351 B:Q9BYC5:0.351
 HOH
 3.419
 NE
 O
ARG B:278 B:318 155.0 0.689 H -57.6 -28.8 67.0 0.298 0.391 A:Q9BYC5:0.391
 HOH
 9.424
 O
 O
ARG C:278 C:318 168.0 0.747 H -58.1 -27.7 NA NA NA
ARG D:278 D:318 155.0 0.689 H -57.2 -28.9 NA NA NA
ARG E:278 E:318 161.0 0.716 H -57.2 -27.6 NA NA NA
ARG F:278 F:318 154.0 0.684 H -56.1 -28.8 NA NA NA
ARG G:278 G:318 154.0 0.684 H -56.7 -29.0 NA NA NA
ARG H:278 H:318 162.0 0.72 H -57.3 -28.4 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ARG A:256 X:318 160.0 0.711 H -69.4 -29.0 69.0 0.307 0.404 A:Q9BYC5:0.404
 HOH
 2.588
 NH2
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ARG A:286 A:318 157.0 0.698 T -73.1 -13.5 79.0 0.351 0.347 B:Q9WTS2:0.347
 EDO
HOH
 3.295
2.712
 NH2
O
 O1
O
ARG B:286 B:318 159.0 0.707 T -74.8 -14.4 85.0 0.378 0.329 A:Q9WTS2:0.329
 HOH
 2.249
 NH2
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ARG A:286 A:318 160.0 0.711 T -62.6 -10.6 NA NA NA
ARG B:286 B:318 155.0 0.689 H -64.4 -27.9 NA NA NA
ARG C:286 C:318 156.0 0.693 H -65.8 -22.8 72.0 0.32 0.373 A:Q9WTS2:0.373
 HOH
 4.757
 O
 O
ARG D:286 D:318 156.0 0.693 T -64.5 -12.6 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ARG A:214 A:318 145.0 0.644 H -72.3 -29.6 55.0 0.244 0.4 D:Q9BYC5:0.4
 HOH
 2.529
 O
 O
ARG B:214 B:318 149.0 0.662 H -70.1 -33.9 NA NA NA
ARG C:214 G:318 153.0 0.68 H -69.8 -30.4 NA NA NA
ARG D:214 H:318 138.0 0.613 H -71.0 -30.1 56.0 0.249 0.364 A:Q9BYC5:0.364
 HOH
 2.566
 O
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ARG A:214 A:318 132.0 0.587 H -68.0 -27.7 46.0 0.204 0.383 B:Q9BYC5:0.382
 HOH
 2.803
 O
 O
ARG B:214 B:318 145.0 0.644 H -67.7 -32.1 63.0 0.28 0.364 A:Q9BYC5:0.364
 HOH
 2.685
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ARG A:212 A:318 140.0 0.622 H -64.8 -40.5 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:211 A:318 159.0 0.707 H -55.7 -31.3 68.0 0.302 0.405 B:Q9BYC5:0.404
 CL
HOH
 2.844
3.271
 NH1
O
 CL
O
ARG B:211 B:318 160.0 0.711 H -54.8 -32.3 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ARG B:211 B:318 145.0 0.644 H -65.7 -40.5 59.0 0.262 0.382 A:Q9BYC5:0.382
 GOL
GOL
HOH
 8.203
4.020
2.580
 N
NE
O
 C3
O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ARG A:318 A:318 159.0 0.707 H -76.6 -22.5