Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66188616 . A C CCDS9775.1:NM_178155.2:c.959cAt>cCt_NP_835368.1:p.320H>P Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 HIS A:280 A:320 8.0 0.041 -134.7 140.1 1.0 0.005 0.036 D:Q9BYC5:0.036
 HOH
 2.879
 O
 O
HIS B:280 B:320 8.0 0.041 -131.1 138.2 NA NA NA
HIS C:280 C:320 5.0 0.026 -134.1 139.0 NA NA NA
HIS D:280 D:320 6.0 0.031 -135.4 138.5 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 HIS A:280 A:320 8.0 0.041 -130.1 141.3 NA NA NA
HIS B:280 B:320 5.0 0.026 -130.2 140.0 1.0 0.005 0.021 A:Q9BYC5:0.021
 HOH
 3.128
 NE2
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 HIS A:280 A:320 5.0 0.026 -106.5 136.3 1.0 0.005 0.021 B:Q9BYC5:0.021
 HOH
 3.051
 NE2
 O
HIS B:280 B:320 5.0 0.026 -108.5 137.4 1.0 0.005 0.021 A:Q9BYC5:0.021
 HOH
 2.893
 NE2
 O
HIS C:280 C:320 6.0 0.031 -106.4 135.9 NA NA NA
HIS D:280 D:320 4.0 0.021 -106.3 137.2 NA NA NA
HIS E:280 E:320 5.0 0.026 -105.8 137.5 NA NA NA
HIS F:280 F:320 5.0 0.026 -106.9 136.8 NA NA NA
HIS G:280 G:320 4.0 0.021 -107.2 136.0 NA NA NA
HIS H:280 H:320 5.0 0.026 -106.5 136.9 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 HIS A:280 A:320 6.0 0.031 -105.6 145.1 2.0 0.01 0.021 B:Q9BYC5:0.021
 HOH
 4.398
 N
 O
HIS B:280 B:320 7.0 0.036 -104.6 145.0 1.0 0.005 0.031 A:Q9BYC5:0.031
 HOH
 8.625
 CA
 O
HIS C:280 C:320 5.0 0.026 -105.3 146.0 NA NA NA
HIS D:280 D:320 5.0 0.026 -104.8 145.4 NA NA NA
HIS E:280 E:320 7.0 0.036 -104.2 146.4 NA NA NA
HIS F:280 F:320 6.0 0.031 -105.5 145.7 NA NA NA
HIS G:280 G:320 7.0 0.036 -105.6 146.3 NA NA NA
HIS H:280 H:320 8.0 0.041 -104.9 146.3 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 HIS A:258 X:320 8.0 0.041 -135.8 133.0 1.0 0.005 0.036 A:Q9BYC5:0.036
 HOH
 2.853
 NE2
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 HIS A:288 A:320 4.0 0.021 -138.1 137.8 0.0 0.0 0.021 B:Q9WTS2:0.021
 HOH
 3.231
 CD2
 O
HIS B:288 B:320 5.0 0.026 -136.5 137.3 0.0 0.0 0.026 A:Q9WTS2:0.026
 HOH
 3.287
 CD2
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 HIS A:288 A:320 5.0 0.026 -127.1 139.2 NA NA NA
HIS B:288 B:320 5.0 0.026 -129.3 143.7 NA NA NA
HIS C:288 C:320 4.0 0.021 -129.4 142.3 0.0 0.0 0.021 A:Q9WTS2:0.021
 HOH
 4.218
 N
 O
HIS D:288 D:320 5.0 0.026 -132.8 140.2 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 HIS A:216 A:320 5.0 0.026 -132.3 141.7 0.0 0.0 0.026 D:Q9BYC5:0.026
 HOH
 3.245
 NE2
 O
HIS B:216 B:320 6.0 0.031 -123.5 149.7 NA NA NA
HIS C:216 G:320 5.0 0.026 -111.1 141.8 NA NA NA
HIS D:216 H:320 6.0 0.031 -124.6 142.3 0.0 0.0 0.031 A:Q9BYC5:0.031
 HOH
 3.192
 NE2
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 HIS A:216 A:320 6.0 0.031 -138.4 141.0 1.0 0.005 0.026 B:Q9BYC5:0.026
 HOH
 3.219
 NE2
 O
HIS B:216 B:320 6.0 0.031 -135.0 142.7 0.0 0.0 0.031 A:Q9BYC5:0.031
 HOH
 3.047
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 HIS A:214 A:320 6.0 0.031 -138.8 138.2 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 HIS A:213 A:320 6.0 0.031 -111.5 142.3 1.0 0.005 0.026 B:Q9BYC5:0.026
 HOH
 2.916
 NE2
 O
HIS B:213 B:320 8.0 0.041 -111.8 143.0 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 HIS B:213 B:320 8.0 0.041 -137.0 137.9 1.0 0.005 0.036 A:Q9BYC5:0.036
 GOL
HOH
 6.038
3.139
 O
O
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 HIS A:320 A:320 6.0 0.031 -128.9 134.2