Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66190966 . G A CCDS9775.1:NM_178155.2:c.1184cGc>cAc_NP_835368.1:p.395R>H Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:355 A:395 109.0 0.484 H -67.5 -35.7 64.0 0.284 0.2 D:Q9BYC5:0.2
 HOH
 2.774
 NH1
 O
ARG B:355 B:395 105.0 0.467 H -62.4 -36.5 NA NA NA
ARG C:355 C:395 109.0 0.484 T -75.3 -18.5 NA NA NA
ARG D:355 D:395 106.0 0.471 T -75.0 -18.2 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:355 A:395 113.0 0.502 T -80.0 -14.7 NA NA NA
ARG B:355 B:395 114.0 0.507 T -79.4 -15.4 59.0 0.262 0.245 A:Q9BYC5:0.244
 HOH
 2.811
 O
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:355 A:395 112.0 0.498 T -70.4 -15.2 64.0 0.284 0.214 B:Q9BYC5:0.213
 HOH
 3.106
 NE
 O
ARG B:355 B:395 109.0 0.484 T -70.1 -15.5 54.0 0.24 0.244 A:Q9BYC5:0.244
 HOH
 3.877
 CG
 O
ARG C:355 C:395 114.0 0.507 T -71.1 -15.0 NA NA NA
ARG D:355 D:395 105.0 0.467 T -70.8 -15.8 NA NA NA
ARG E:355 E:395 106.0 0.471 T -70.2 -15.8 NA NA NA
ARG F:355 F:395 112.0 0.498 T -70.8 -14.9 NA NA NA
ARG G:355 G:395 105.0 0.467 T -70.0 -16.1 NA NA NA
ARG H:355 H:395 115.0 0.511 T -70.6 -15.2 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:355 A:395 109.0 0.484 T -71.7 -16.4 59.0 0.262 0.222 B:Q9BYC5:0.222
 HOH
 3.971
 NH1
 O
ARG B:355 B:395 112.0 0.498 T -71.6 -16.4 65.0 0.289 0.209 A:Q9BYC5:0.209
 HOH
 6.321
 NH1
 O
ARG C:355 C:395 113.0 0.502 T -71.9 -17.5 NA NA NA
ARG D:355 D:395 110.0 0.489 T -72.1 -15.7 NA NA NA
ARG E:355 E:395 113.0 0.502 T -71.6 -16.1 NA NA NA
ARG F:355 F:395 106.0 0.471 T -72.2 -16.7 NA NA NA
ARG G:355 G:395 108.0 0.48 T -71.3 -15.9 NA NA NA
ARG H:355 H:395 108.0 0.48 T -71.7 -16.1 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ARG A:333 X:395 107.0 0.476 T -65.4 -27.1 60.0 0.267 0.209 A:Q9BYC5:0.209
 HOH
 2.897
 NH1
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ARG A:363 A:395 109.0 0.484 T -74.9 -14.7 62.0 0.276 0.208 B:Q9WTS2:0.209
 EDO
EDO
HOH
 6.347
9.495
2.604
 N
NH1
O
 O1
O2
O
ARG B:363 B:395 108.0 0.48 T -77.6 -13.2 64.0 0.284 0.196 A:Q9WTS2:0.196
 HOH
 2.647
 O
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ARG A:363 A:395 107.0 0.476 H -75.9 -22.3 NA NA NA
ARG B:363 B:395 110.0 0.489 T -71.8 -14.8 NA NA NA
ARG C:363 C:395 108.0 0.48 T -70.7 -17.6 65.0 0.289 0.191 A:Q9WTS2:0.191
 PG4
HOH
 6.856
2.580
 O
O
 HO5
O
ARG D:363 D:395 108.0 0.48 T -74.1 -13.1 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ARG A:291 A:395 107.0 0.476 T -81.8 -21.4 67.0 0.298 0.178 D:Q9BYC5:0.178
 HOH
 2.340
 NH2
 O
ARG B:291 B:395 106.0 0.471 T -79.6 -19.9 NA NA NA
ARG C:291 G:395 110.0 0.489 T -78.5 -17.9 NA NA NA
ARG D:291 H:395 104.0 0.462 T -80.1 -14.3 61.0 0.271 0.191 A:Q9BYC5:0.191
 HOH
 2.733
 O
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ARG A:291 A:395 105.0 0.467 T -82.1 -20.1 65.0 0.289 0.178 B:Q9BYC5:0.178
 HOH
 2.329
 NH2
 O
ARG B:291 B:395 116.0 0.516 T -73.8 -15.4 62.0 0.276 0.24 A:Q9BYC5:0.24
 HOH
 2.467
 NH1
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ARG A:289 A:395 107.0 0.476 T -74.6 -14.9 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ARG A:288 A:395 114.0 0.507 T -69.3 -17.7 64.0 0.284 0.223 B:Q9BYC5:0.222
ARG B:288 B:395 118.0 0.524 H -70.7 -19.0 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ARG B:288 B:395 106.0 0.471 T -75.8 -15.7 63.0 0.28 0.191 A:Q9BYC5:0.191
 GOL
HOH
 7.383
2.531
 O
NH2
 O1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ARG A:395 A:395 115.0 0.511 T -78.8 -18.5