Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66191012 . C A CCDS9775.1:NM_178155.2:c.1230gaC>gaA_NP_835368.1:p.410D>E Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:370 A:410 31.0 0.207 -106.3 104.2 31.0 0.207 0.0 GDP
HOH
 6.493
2.725
 N
O
 O6
O
ASP B:370 B:410 31.0 0.207 -106.4 104.3 NA NA NA
ASP C:370 C:410 33.0 0.22 -106.2 106.3 NA NA NA
ASP D:370 D:410 35.0 0.233 -105.8 108.9 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:370 A:410 32.0 0.213 -101.4 97.7 NA NA NA
ASP B:370 B:410 38.0 0.253 -100.2 97.8 38.0 0.253 0.0 GDP
HOH
 6.451
2.661
 N
OD1
 O6
O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:370 A:410 29.0 0.193 -103.3 94.8 29.0 0.193 0.0 GDP
HOH
 6.554
2.755
 N
O
 O6
O
ASP B:370 B:410 34.0 0.227 -102.6 94.3 34.0 0.227 0.0 GDP
HOH
 6.433
4.242
 N
N
 O6
O
ASP C:370 C:410 33.0 0.22 -102.6 95.6 NA NA NA
ASP D:370 D:410 35.0 0.233 -103.1 96.2 NA NA NA
ASP E:370 E:410 37.0 0.247 -102.0 94.9 NA NA NA
ASP F:370 F:410 32.0 0.213 -102.2 95.7 NA NA NA
ASP G:370 G:410 35.0 0.233 -103.3 94.1 NA NA NA
ASP H:370 H:410 36.0 0.24 -103.4 96.2 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:370 A:410 37.0 0.247 -107.3 98.6 37.0 0.247 0.0 GDP
 6.388
 N
 O6
ASP B:370 B:410 38.0 0.253 -106.5 97.7 38.0 0.253 0.0 GDP
HOH
 6.330
4.509
 N
CA
 O6
O
ASP C:370 C:410 36.0 0.24 -105.9 98.5 NA NA NA
ASP D:370 D:410 33.0 0.22 -106.3 97.8 NA NA NA
ASP E:370 E:410 35.0 0.233 -106.2 97.7 NA NA NA
ASP F:370 F:410 31.0 0.207 -106.7 98.0 NA NA NA
ASP G:370 G:410 35.0 0.233 -106.0 98.6 NA NA NA
ASP H:370 H:410 35.0 0.233 -107.0 99.5 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ASP A:348 X:410 36.0 0.24 -147.5 97.6 36.0 0.24 0.0 HOH
 5.976
 N
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ASP A:378 A:410 33.0 0.22 -98.2 116.5 33.0 0.22 0.0 HOH
 2.613
 O
 O
ASP B:378 B:410 31.0 0.207 -102.1 109.3 31.0 0.207 0.0 HOH
 2.465
 O
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ASP A:378 A:410 32.0 0.213 -113.3 101.5 NA NA NA
ASP B:378 B:410 33.0 0.22 -115.5 103.5 NA NA NA
ASP C:378 C:410 26.0 0.173 -112.9 101.0 26.0 0.173 0.0 GDP
HOH
 6.406
2.780
 N
O
 O6
O
ASP D:378 D:410 30.0 0.2 -103.0 101.3 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ASP A:306 A:410 35.0 0.233 -111.6 99.7 35.0 0.233 0.0 GDP
HOH
 6.451
2.660
 N
O
 O6
O
ASP B:306 B:410 35.0 0.233 -106.4 101.1 NA NA NA
ASP C:306 G:410 48.0 0.32 -126.4 86.5 NA NA NA
ASP D:306 H:410 35.0 0.233 -120.2 117.8 35.0 0.233 0.0 HOH
 3.133
 N
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ASP A:306 A:410 35.0 0.233 -117.5 107.3 35.0 0.233 0.0 HOH
 6.579
 OD2
 O
ASP B:306 B:410 37.0 0.247 -98.5 111.9 37.0 0.247 0.0 HOH
 8.936
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ASP A:304 A:410 37.0 0.247 -111.6 100.5 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ASP A:303 A:410 32.0 0.213 -96.4 99.3 32.0 0.213 0.0 GDP
 6.538
 N
 O6
ASP B:303 B:410 37.0 0.247 -94.9 99.0 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ASP B:303 B:410 57.0 0.38 -120.5 91.6 57.0 0.38 0.0 GDP
HOH
 6.703
5.318
 N
OD2
 O6
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ASP A:410 A:410 30.0 0.2 -104.9 103.3