Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66191016 . T A CCDS9775.1:NM_178155.2:c.1234Tct>Act_NP_835368.1:p.412S>T Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 SER A:372 A:412 79.0 0.687 T -88.5 -5.9 79.0 0.687 0.0 HOH
 2.754
 O
 O
SER B:372 B:412 78.0 0.678 T -88.8 -5.6 NA NA NA
SER C:372 C:412 73.0 0.635 T -89.3 -6.6 NA NA NA
SER D:372 D:412 72.0 0.626 T -89.2 -6.0 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 SER A:372 A:412 74.0 0.643 T -87.4 -7.6 NA NA NA
SER B:372 B:412 88.0 0.765 T -89.2 -6.8 88.0 0.765 0.0 HOH
 2.724
 O
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 SER A:372 A:412 80.0 0.696 T -80.7 -4.8 80.0 0.696 0.0 GOL
HOH
 8.540
4.203
 N
N
 C2
O
SER B:372 B:412 78.0 0.678 T -80.6 -4.9 78.0 0.678 0.0 HOH
 3.139
 O
 O
SER C:372 C:412 80.0 0.696 T -80.9 -4.9 NA NA NA
SER D:372 D:412 76.0 0.661 T -80.5 -5.0 NA NA NA
SER E:372 E:412 79.0 0.687 T -81.3 -5.4 NA NA NA
SER F:372 F:412 79.0 0.687 T -80.2 -4.5 NA NA NA
SER G:372 G:412 79.0 0.687 T -79.2 -3.9 NA NA NA
SER H:372 H:412 77.0 0.67 T -79.4 -4.2 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 SER A:372 A:412 78.0 0.678 T -68.1 -7.4 78.0 0.678 0.0
SER B:372 B:412 80.0 0.696 T -68.9 -8.0 80.0 0.696 0.0 HOH
 6.785
 N
 O
SER C:372 C:412 74.0 0.643 H -68.9 -8.2 NA NA NA
SER D:372 D:412 78.0 0.678 T -68.8 -8.2 NA NA NA
SER E:372 E:412 76.0 0.661 T -69.2 -8.7 NA NA NA
SER F:372 F:412 78.0 0.678 T -68.6 -7.8 NA NA NA
SER G:372 G:412 77.0 0.67 T -69.2 -7.7 NA NA NA
SER H:372 H:412 75.0 0.652 T -69.3 -8.1 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 SER A:350 X:412 77.0 0.67 H -70.2 -28.9 77.0 0.67 0.0
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 THR A:380 A:412 87.0 0.621 T -85.9 -7.8 87.0 0.621 0.0 HOH
 3.214
 OG1
 O
THR B:380 B:412 90.0 0.643 T -91.3 -11.4 90.0 0.643 0.0 HOH
 3.279
 C
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 THR A:380 A:412 97.0 0.693 T -84.6 -8.3 NA NA NA
THR B:380 B:412 96.0 0.686 T -80.3 -9.0 NA NA NA
THR C:380 C:412 96.0 0.686 T -88.9 -3.1 96.0 0.686 0.0 HOH
 2.933
 O
 O
THR D:380 D:412 96.0 0.686 T -86.6 -3.9 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 SER A:308 A:412 72.0 0.626 T -89.2 -4.2 72.0 0.626 0.0 HOH
 3.793
 N
 O
SER B:308 B:412 74.0 0.643 T -84.4 -6.8 NA NA NA
SER C:308 G:412 67.0 0.583 T -69.8 -10.6 NA NA NA
SER D:308 H:412 72.0 0.626 H -83.4 -10.9 72.0 0.626 0.0 HOH
 6.132
 N
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 SER A:308 A:412 71.0 0.617 T -92.7 -4.8 71.0 0.617 0.0 HOH
 6.055
 O
 O
SER B:308 B:412 74.0 0.643 T -88.9 1.7 74.0 0.643 0.0
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 SER A:306 A:412 72.0 0.626 T -86.4 -9.8 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 SER A:305 A:412 71.0 0.617 T -75.9 -10.8 71.0 0.617 0.0
SER B:305 B:412 82.0 0.713 T -75.5 -11.6 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 SER B:305 B:412 73.0 0.635 T -75.9 -23.0 73.0 0.635 0.0 HOH
 6.566
 OG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 SER A:412 A:412 69.0 0.6 T -81.4 -24.1