Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66200049 . A C CCDS9775.1:NM_178155.2:c.1360Ata>Cta_NP_835368.1:p.454I>L Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:414 A:454 5.0 0.029 H -62.6 -39.4 5.0 0.029 0.0 GDP
HOH
 6.090
3.710
 CD1
CG2
 O3'
O
ILE B:414 B:454 5.0 0.029 H -63.7 -39.0 NA NA NA
ILE C:414 C:454 4.0 0.023 H -63.2 -38.5 NA NA NA
ILE D:414 D:454 8.0 0.046 H -63.7 -39.5 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:414 A:454 4.0 0.023 H -67.0 -39.5 NA NA NA
ILE B:414 B:454 4.0 0.023 H -64.3 -38.6 4.0 0.023 0.0 GDP
HOH
 6.154
3.546
 CD1
CG2
 O3'
O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:414 A:454 5.0 0.029 H -62.9 -39.8 5.0 0.029 0.0 GDP
HOH
 6.458
7.694
 CD1
N
 O1A
O
ILE B:414 B:454 4.0 0.023 H -63.2 -39.9 4.0 0.023 0.0 GDP
HOH
 6.182
4.611
 CD1
CG2
 O2A
O
ILE C:414 C:454 5.0 0.029 H -62.8 -39.0 NA NA NA
ILE D:414 D:454 5.0 0.029 H -63.0 -39.8 NA NA NA
ILE E:414 E:454 5.0 0.029 H -62.6 -40.4 NA NA NA
ILE F:414 F:454 4.0 0.023 H -63.3 -39.7 NA NA NA
ILE G:414 G:454 4.0 0.023 H -63.8 -41.1 NA NA NA
ILE H:414 H:454 4.0 0.023 H -63.0 -39.5 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:414 A:454 5.0 0.029 H -61.0 -42.1 5.0 0.029 0.0 GDP
HOH
 6.489
5.495
 N
O
 N1
O
ILE B:414 B:454 4.0 0.023 H -60.4 -41.0 4.0 0.023 0.0 GDP
 6.263
 CD1
 O1A
ILE C:414 C:454 5.0 0.029 H -60.7 -42.2 NA NA NA
ILE D:414 D:454 5.0 0.029 H -60.7 -42.8 NA NA NA
ILE E:414 E:454 5.0 0.029 H -60.8 -42.5 NA NA NA
ILE F:414 F:454 5.0 0.029 H -60.4 -42.1 NA NA NA
ILE G:414 G:454 6.0 0.034 H -59.8 -42.2 NA NA NA
ILE H:414 H:454 7.0 0.04 H -60.6 -41.5 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ILE A:392 X:454 5.0 0.029 H -55.7 -44.1 5.0 0.029 0.0 HOH
 5.990
 N
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ILE A:422 A:454 8.0 0.046 H -62.8 -38.8 8.0 0.046 0.0 SO4
HOH
 7.861
3.333
 CD1
CG2
 O3
O
ILE B:422 B:454 7.0 0.04 H -57.8 -41.1 7.0 0.04 0.0 SO4
EDO
HOH
 7.644
8.651
3.430
 CD1
CG2
CG2
 O1
O2
O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ILE A:422 A:454 4.0 0.023 H -62.4 -37.4 NA NA NA
ILE B:422 B:454 4.0 0.023 H -64.9 -39.0 NA NA NA
ILE C:422 C:454 4.0 0.023 H -61.7 -42.0 4.0 0.023 0.0 GDP
HOH
 6.156
3.471
 CD1
CG2
 O1A
O
ILE D:422 D:454 4.0 0.023 H -66.5 -43.9 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ILE A:350 A:454 5.0 0.029 H -65.2 -37.4 5.0 0.029 0.0 GDP
HOH
 6.402
3.771
 N
CG2
 N2
O
ILE B:350 B:454 5.0 0.029 H -61.1 -39.8 NA NA NA
ILE C:350 G:454 5.0 0.029 H -62.3 -40.1 NA NA NA
ILE D:350 H:454 7.0 0.04 H -60.7 -41.1 7.0 0.04 0.0 SO4
HOH
 9.522
3.521
 CD1
CG2
 O4
O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ILE A:350 A:454 8.0 0.046 H -60.5 -37.6 8.0 0.046 0.0 HOH
 4.094
 CG2
 O
ILE B:350 B:454 7.0 0.04 H -63.6 -37.6 7.0 0.04 0.0 HOH
 4.120
 CG2
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ILE A:348 A:454 5.0 0.029 H -60.9 -43.8 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:347 A:454 5.0 0.029 H -64.7 -38.7 5.0 0.029 0.0 GDP
 6.198
 CD1
 O3'
ILE B:347 B:454 4.0 0.023 H -65.0 -38.8 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ILE B:332 B:454 5.0 0.029 H -62.8 -42.1 5.0 0.029 0.0 GDP
HOH
 6.301
3.856
 CD1
CG2
 O3'
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ILE A:454 A:454 4.0 0.023 H -61.5 -41.2