Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66208832 . A C CCDS9775.1:NM_178155.2:c.1432Att>Ctt_NP_835368.1:p.478I>L Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:438 A:478 14.0 0.08 H -60.8 -39.1 14.0 0.08 0.0 HOH
 3.723
 CG2
 O
ILE B:438 B:478 15.0 0.086 H -59.9 -40.6 NA NA NA
ILE C:438 C:478 16.0 0.091 H -60.5 -38.4 NA NA NA
ILE D:438 D:478 18.0 0.103 H -62.4 -39.4 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:438 A:478 17.0 0.097 H -60.0 -39.9 NA NA NA
ILE B:438 B:478 17.0 0.097 H -60.8 -40.1 17.0 0.097 0.0 HOH
 3.458
 CG2
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:438 A:478 19.0 0.109 H -57.6 -40.5 19.0 0.109 0.0 HOH
 4.496
 CG2
 O
ILE B:438 B:478 18.0 0.103 H -57.4 -39.9 18.0 0.103 0.0 HOH
 4.401
 CD1
 O
ILE C:438 C:478 21.0 0.12 H -57.4 -40.0 NA NA NA
ILE D:438 D:478 19.0 0.109 H -57.1 -40.3 NA NA NA
ILE E:438 E:478 19.0 0.109 H -57.0 -40.3 NA NA NA
ILE F:438 F:478 22.0 0.126 H -57.7 -41.1 NA NA NA
ILE G:438 G:478 19.0 0.109 H -57.2 -40.9 NA NA NA
ILE H:438 H:478 20.0 0.114 H -57.2 -40.1 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:438 A:478 16.0 0.091 H -63.5 -34.6 16.0 0.091 0.0 HOH
 3.973
 CG2
 O
ILE B:438 B:478 17.0 0.097 H -63.8 -33.9 17.0 0.097 0.0
ILE C:438 C:478 16.0 0.091 H -64.4 -33.9 NA NA NA
ILE D:438 D:478 13.0 0.074 H -64.5 -34.8 NA NA NA
ILE E:438 E:478 18.0 0.103 H -63.6 -34.4 NA NA NA
ILE F:438 F:478 18.0 0.103 H -63.5 -33.9 NA NA NA
ILE G:438 G:478 16.0 0.091 H -63.7 -33.4 NA NA NA
ILE H:438 H:478 15.0 0.086 H -64.2 -33.7 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ILE A:416 X:478 19.0 0.109 H -67.9 -43.2 19.0 0.109 0.0 HOH
 6.441
 C
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ILE A:446 A:478 14.0 0.08 H -61.3 -38.3 14.0 0.08 0.0 HOH
 3.671
 CG2
 O
ILE B:446 B:478 15.0 0.086 H -62.8 -37.0 15.0 0.086 0.0 EDO
HOH
 4.104
3.799
 CG2
CG2
 O2
O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ILE A:446 A:478 15.0 0.086 H -61.1 -37.5 NA NA NA
ILE B:446 B:478 15.0 0.086 H -57.9 -38.6 NA NA NA
ILE C:446 C:478 17.0 0.097 H -57.5 -40.2 17.0 0.097 0.0 HOH
 3.557
 CG2
 O
ILE D:446 D:478 19.0 0.109 H -55.7 -38.9 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ILE A:374 A:478 18.0 0.103 H -59.6 -38.9 18.0 0.103 0.0 HOH
 3.633
 CG2
 O
ILE B:374 B:478 16.0 0.091 H -59.0 -37.9 NA NA NA
ILE C:374 G:478 13.0 0.074 H -59.5 -34.7 NA NA NA
ILE D:374 H:478 14.0 0.08 H -59.5 -39.3 14.0 0.08 0.0 HOH
 3.668
 CG2
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ILE A:374 A:478 17.0 0.097 H -62.7 -36.9 17.0 0.097 0.0 HOH
 3.566
 CG2
 O
ILE B:374 B:478 19.0 0.109 H -62.2 -32.6 19.0 0.109 0.0 HOH
 3.680
 CG2
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ILE A:372 A:478 19.0 0.109 H -60.6 -44.3 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ILE A:371 A:478 20.0 0.114 H -62.7 -36.1 20.0 0.114 0.0 HOH
 7.520
 O
 O
ILE B:371 B:478 18.0 0.103 H -61.2 -34.9 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ILE B:356 B:478 17.0 0.097 H -66.3 -41.7 17.0 0.097 0.0 GOL
HOH
 8.508
3.556
 O
CG2
 C2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ILE A:478 A:478 16.0 0.091 H -61.5 -40.7