Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66208857 . C A CCDS9775.1:NM_178155.2:c.1457gCc>gAc_NP_835368.1:p.486A>D Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:446 A:486 0.0 0.0 -100.1 21.9 0.0 0.0 0.0 EDO
HOH
 6.850
2.961
 CB
N
 C1
O
ALA B:446 B:486 0.0 0.0 -98.9 20.1 NA NA NA
ALA C:446 C:486 0.0 0.0 -97.7 19.5 NA NA NA
ALA D:446 D:486 0.0 0.0 -98.2 19.8 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:446 A:486 0.0 0.0 -98.7 19.5 NA NA NA
ALA B:446 B:486 0.0 0.0 -98.9 20.4 0.0 0.0 0.0 HOH
 2.888
 N
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:446 A:486 0.0 0.0 -99.3 24.1 0.0 0.0 0.0 HOH
 3.019
 N
 O
ALA B:446 B:486 0.0 0.0 -100.4 23.0 0.0 0.0 0.0 HOH
 2.852
 N
 O
ALA C:446 C:486 0.0 0.0 -99.3 24.6 NA NA NA
ALA D:446 D:486 0.0 0.0 -99.8 23.4 NA NA NA
ALA E:446 E:486 0.0 0.0 -98.9 22.5 NA NA NA
ALA F:446 F:486 0.0 0.0 -99.3 23.2 NA NA NA
ALA G:446 G:486 0.0 0.0 -99.5 22.8 NA NA NA
ALA H:446 H:486 0.0 0.0 -99.2 23.1 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:446 A:486 1.0 0.009 -90.6 23.3 1.0 0.009 0.0 HOH
 8.620
 N
 O
ALA B:446 B:486 1.0 0.009 -90.8 21.6 1.0 0.009 0.0 HOH
 6.654
 N
 O
ALA C:446 C:486 1.0 0.009 -90.5 23.0 NA NA NA
ALA D:446 D:486 1.0 0.009 -91.4 22.0 NA NA NA
ALA E:446 E:486 1.0 0.009 -91.8 23.7 NA NA NA
ALA F:446 F:486 0.0 0.0 -92.2 23.3 NA NA NA
ALA G:446 G:486 0.0 0.0 -91.1 22.5 NA NA NA
ALA H:446 H:486 0.0 0.0 -91.7 21.4 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 ALA A:424 X:486 0.0 0.0 -102.2 30.9 0.0 0.0 0.0 HOH
 3.089
 N
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ALA A:454 A:486 0.0 0.0 -98.9 22.0 0.0 0.0 0.0 HOH
 2.963
 N
 O
ALA B:454 B:486 0.0 0.0 -95.4 23.3 0.0 0.0 0.0 HOH
 2.938
 N
 O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 ALA A:454 A:486 0.0 0.0 -99.2 20.2 NA NA NA
ALA B:454 B:486 1.0 0.009 -100.7 19.0 NA NA NA
ALA C:454 C:486 0.0 0.0 -100.6 18.4 0.0 0.0 0.0 HOH
 3.479
 C
 O
ALA D:454 D:486 0.0 0.0 -101.8 22.5 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ALA A:382 A:486 0.0 0.0 -105.6 31.9 0.0 0.0 0.0 HOH
 2.989
 N
 O
ALA B:382 B:486 0.0 0.0 -106.1 23.4 NA NA NA
ALA C:382 G:486 0.0 0.0 -100.3 21.7 NA NA NA
ALA D:382 H:486 0.0 0.0 -101.9 18.7 0.0 0.0 0.0 HOH
 3.064
 N
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 ALA A:382 A:486 0.0 0.0 -105.2 23.0 0.0 0.0 0.0 HOH
 3.151
 N
 O
ALA B:382 B:486 0.0 0.0 -105.4 25.7 0.0 0.0 0.0 HOH
 3.091
 N
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 ALA A:380 A:486 0.0 0.0 -99.2 19.4 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 ALA A:379 A:486 0.0 0.0 -106.5 26.6 0.0 0.0 0.0 HOH
 2.838
 N
 O
ALA B:379 B:486 1.0 0.009 -105.8 23.9 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 ALA B:364 B:486 0.0 0.0 -101.0 19.8 0.0 0.0 0.0 GOL
GOL
HOH
 8.501
6.972
3.115
 CB
O
N
 C1
O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 ALA A:486 A:486 0.0 0.0 -113.2 21.0