Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66208969 . G A CCDS9775.1:NM_178155.2:c.1569atG>atA_NP_835368.1:p.523M>I Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 MET A:483 A:523 1.0 0.005 B -145.8 144.2 1.0 0.005 0.0 HOH
 4.315
 C
 O
MET B:483 B:523 1.0 0.005 B -143.2 143.3 NA NA NA
MET C:483 C:523 1.0 0.005 B -142.7 144.0 NA NA NA
MET D:483 D:523 1.0 0.005 B -143.8 144.9 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 MET A:483 A:523 1.0 0.005 B -144.1 146.0 NA NA NA
MET B:483 B:523 2.0 0.011 B -142.4 140.8 2.0 0.011 0.0 HOH
 3.210
 O
 O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 MET A:483 A:523 1.0 0.005 B -141.0 139.8 1.0 0.005 0.0 HOH
 9.339
 CE
 O
MET B:483 B:523 0.0 0.0 B -141.6 138.1 0.0 0.0 0.0 HOH
 6.791
 O
 O
MET C:483 C:523 1.0 0.005 B -142.5 140.0 NA NA NA
MET D:483 D:523 1.0 0.005 B -141.1 138.3 NA NA NA
MET E:483 E:523 1.0 0.005 B -140.9 137.1 NA NA NA
MET F:483 F:523 2.0 0.011 B -142.1 139.6 NA NA NA
MET G:483 G:523 1.0 0.005 B -140.9 138.7 NA NA NA
MET H:483 H:523 1.0 0.005 B -141.3 139.2 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 MET A:483 A:523 0.0 0.0 B -136.0 136.6 0.0 0.0 0.0
MET B:483 B:523 0.0 0.0 B -136.3 136.9 0.0 0.0 0.0 HOH
 4.454
 C
 O
MET C:483 C:523 1.0 0.005 B -136.0 136.5 NA NA NA
MET D:483 D:523 0.0 0.0 B -136.7 138.0 NA NA NA
MET E:483 E:523 1.0 0.005 B -136.5 137.6 NA NA NA
MET F:483 F:523 0.0 0.0 B -137.4 137.8 NA NA NA
MET G:483 G:523 0.0 0.0 B -135.6 138.2 NA NA NA
MET H:483 H:523 0.0 0.0 B -136.6 137.5 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 MET A:461 X:523 2.0 0.011 B -151.5 165.0 2.0 0.011 0.0 HOH
 4.684
 CA
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 MET A:491 A:523 1.0 0.005 B -143.7 144.0 1.0 0.005 0.0 HOH
 3.662
 O
 O
MET B:491 B:523 1.0 0.005 B -145.3 141.2 1.0 0.005 0.0 EDO
HOH
 8.946
3.842
 CE
O
 O2
O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 MET A:491 A:523 1.0 0.005 B -148.1 141.3 NA NA NA
MET B:491 B:523 1.0 0.005 B -145.9 144.7 NA NA NA
MET C:491 C:523 1.0 0.005 B -142.9 137.7 1.0 0.005 0.0 HOH
 4.724
 C
 O
MET D:491 D:523 2.0 0.011 B -145.4 141.9 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 MET A:419 A:523 1.0 0.005 B -141.4 140.6 1.0 0.005 0.0 HOH
 6.872
 O
 O
MET B:419 B:523 0.0 0.0 B -140.8 143.3 NA NA NA
MET C:419 G:523 0.0 0.0 B -141.4 142.8 NA NA NA
MET D:419 H:523 1.0 0.005 B -144.7 137.8 1.0 0.005 0.0 HOH
 3.889
 C
 O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 MET A:419 A:523 1.0 0.005 B -140.9 150.4 1.0 0.005 0.0 HOH
 3.958
 O
 O
MET B:419 B:523 0.0 0.0 B -139.1 137.9 0.0 0.0 0.0 HOH
 4.237
 C
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 MET A:417 A:523 1.0 0.005 B -145.7 145.3 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 MET A:416 A:523 0.0 0.0 B -132.2 144.1 0.0 0.0 0.0
MET B:416 B:523 2.0 0.011 B -135.9 143.7 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 MET B:401 B:523 1.0 0.005 B -144.4 139.5 1.0 0.005 0.0 GOL
HOH
 9.662
6.682
 C
O
 O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 MET A:523 A:523 2.0 0.011 B -139.3 139.6