Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr14 66209049 . C A CCDS9775.1:NM_178155.2:c.1649aCg>aAg_NP_835368.1:p.550T>K Homo sapiens fucosyltransferase 8 (FUT8), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6x5h 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:510 A:550 97.0 0.693 E -113.7 136.2 97.0 0.693 0.0 HOH
 2.851
 O
 O
THR B:510 B:550 98.0 0.7 E -111.3 136.7 NA NA NA
THR C:510 C:550 95.0 0.679 E -111.5 138.2 NA NA NA
THR D:510 D:550 94.0 0.671 E -111.3 138.4 NA NA NA
6x5r 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:510 A:550 93.0 0.664 E -115.2 135.8 NA NA NA
THR B:510 B:550 103.0 0.736 E -116.7 131.9 103.0 0.736 0.0 NAG
MAN
HOH
 8.880
9.570
5.868
 CG2
CG2
CG2
 O6
O4
O
6x5t 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:510 A:550 89.0 0.636 E -119.1 142.4 89.0 0.636 0.0 NAG
 8.313
 CG2
 O6
THR B:510 B:550 88.0 0.629 E -117.2 142.3 88.0 0.629 0.0 HOH
 3.708
 O
 O
THR C:510 C:550 88.0 0.629 E -118.6 143.9 NA NA NA
THR D:510 D:550 91.0 0.65 E -118.0 143.1 NA NA NA
THR E:510 E:550 91.0 0.65 E -118.6 142.3 NA NA NA
THR F:510 F:550 88.0 0.629 E -118.9 142.7 NA NA NA
THR G:510 G:550 88.0 0.629 E -118.6 142.1 NA NA NA
THR H:510 H:550 87.0 0.621 E -118.6 142.6 NA NA NA
6x5u 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:510 A:550 87.0 0.621 E -113.0 134.6 87.0 0.621 0.0 MAN
NAG
MAN
HOH
 9.658
8.445
8.537
5.931
 CG2
CG2
CG2
O
 O3
O6
O6
O
THR B:510 B:550 87.0 0.621 E -113.6 135.2 87.0 0.621 0.0 MAN
NAG
MAN
 9.810
8.867
8.395
 CG2
CG2
CG2
 O3
O6
O6
THR C:510 C:550 86.0 0.614 E -112.6 133.6 NA NA NA
THR D:510 D:550 88.0 0.629 E -113.8 134.7 NA NA NA
THR E:510 E:550 85.0 0.607 E -113.9 135.4 NA NA NA
THR F:510 F:550 87.0 0.621 E -114.3 134.8 NA NA NA
THR G:510 G:550 89.0 0.636 E -114.2 135.0 NA NA NA
THR H:510 H:550 89.0 0.636 E -113.7 134.3 NA NA NA
2de0 1 Q9BYC5 100.0 0.0 X-RAY
 2006-12-26 THR A:488 X:550 78.0 0.557 E -127.6 128.8 78.0 0.557 0.0 HOH
 7.718
 CG2
 O
6vlf 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 THR A:518 A:550 89.0 0.636 E -120.1 134.3 89.0 0.636 0.0 HOH
 2.645
 OG1
 O
THR B:518 B:550 92.0 0.657 E -111.3 132.6 92.0 0.657 0.0 EDO
HOH
 3.559
4.784
 CG2
O
 O2
O
6vlg 1 Q9WTS2 96.07 0.0 X-RAY
 2020-02-26 THR A:518 A:550 90.0 0.643 E -122.3 134.5 NA NA NA
THR B:518 B:550 85.0 0.607 E -121.1 131.1 NA NA NA
THR C:518 C:550 88.0 0.629 E -109.3 143.8 88.0 0.629 0.0 HOH
 2.800
 OG1
 O
THR D:518 D:550 90.0 0.643 E -107.6 139.9 NA NA NA
6vld 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 THR A:446 A:550 88.0 0.629 E -115.6 137.1 88.0 0.629 0.0 MAN
NAG
MAN
SO4
HOH
 9.303
8.199
9.139
7.702
8.247
 CG2
CG2
CG2
CG2
O
 O3
C6
O4
O1
O
THR B:446 B:550 86.0 0.614 E -111.2 136.8 NA NA NA
THR C:446 G:550 98.0 0.7 E -120.3 133.3 NA NA NA
THR D:446 H:550 95.0 0.679 E -122.1 134.9 95.0 0.679 0.0 NAG
MAN
SO4
HOH
 8.721
9.373
7.903
3.528
 CG2
CG2
CG2
CG2
 C6
O4
O1
O
6vle 1 Q9BYC5 100.0 0.0 X-RAY
 2020-02-26 THR A:446 A:550 94.0 0.671 E -118.3 134.3 94.0 0.671 0.0 HOH
 4.857
 O
 O
THR B:446 B:550 102.0 0.729 E -110.2 131.7 102.0 0.729 0.0 HOH
 3.821
 O
 O
6tkv 1 Q9BYC5 100.0 0.0 X-RAY
 2020-01-29 THR A:444 A:550 81.0 0.579 E -100.9 134.7 NA NA NA
6x5s 1 Q9BYC5 100.0 0.0 X-RAY
 2020-10-07 THR A:443 A:550 94.0 0.671 E -112.1 136.2 94.0 0.671 0.0 NAG
NAG
MAN
HOH
 8.593
9.144
9.402
8.084
 CG2
CG2
CG2
OG1
 O6
O6
O4
O
THR B:443 B:550 99.0 0.707 E -111.0 136.7 NA NA NA
6tkv 2 Q9BYC5 96.79 0.0 X-RAY
 2020-01-29 THR B:428 B:550 88.0 0.629 E -106.1 139.7 88.0 0.629 0.0 MAN
NAG
MAN
HOH
 9.804
8.275
9.054
3.157
 CG2
CG2
CG2
O
 O3
C6
O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9byc5-f1 1 Q9BYC5 100.0 0.0 THR A:550 A:550 95.0 0.679 E -106.0 140.6