Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr14 | 96998848 | . | G | A | CCDS9946.1:NM_032632.4:c.698cGc>cAc_NP_116021.2:p.233R>H | Homo sapiens poly(A) polymerase alpha (PAPOLA), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1q78 | 1 | P25500 | 99.42 | 0.0 |
X-RAY |
2004-09-07 | ARG | A:233 | A:233 | 90.0 | 0.4 | H | -64.3 | -32.8 | 90.0 | 0.4 | 0.0 |
HOH |
4.899 |
N |
O |
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1q79 | 1 | P25500 | 99.42 | 0.0 |
X-RAY |
2004-09-07 | ARG | A:233 | A:233 | 89.0 | 0.396 | H | -64.3 | -19.0 | 89.0 | 0.396 | 0.0 |
HOH |
4.729 |
NH2 |
O |
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1f5a | 1 | P25500 | 99.42 | 0.0 |
X-RAY |
2000-09-13 | ARG | A:233 | A:233 | 74.0 | 0.329 | H | -62.5 | -19.7 | 74.0 | 0.329 | 0.0 |
HOH |
4.648 |
NH2 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p51003-f1 | 1 | P51003 | 100.0 | 0.0 | ARG | A:233 | A:233 | 78.0 | 0.347 | H | -68.5 | -27.9 | |
af-q9nrj5-f1 | 1 | Q9NRJ5 | 86.08 | 0.0 | CYS | A:233 | A:233 | 24.0 | 0.178 | H | -59.4 | -34.1 |