Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr15 | 45654341 | . | C | A | CCDS10122.1:NM_001482.2:c.1238cGg>cTg_NP_001473.1:p.413R>L | Homo sapiens glycine amidinotransferase (GATM), transcript variant 1, mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1998-01-28 | ARG | A:413 | A:413 | 48.0 | 0.213 | E | -141.6 | 125.2 | 48.0 | 0.213 | 0.0 |
HOH |
1.877 |
HH21 |
H2 |
||
2jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1998-01-28 | ARG | A:413 | A:413 | 47.0 | 0.209 | E | -138.8 | 123.4 | 47.0 | 0.209 | 0.0 |
HOH |
2.229 |
HH21 |
O |
||
3jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1998-01-28 | ARG | A:413 | A:413 | 51.0 | 0.227 | E | -142.0 | 128.0 | 51.0 | 0.227 | 0.0 |
HOH |
2.501 |
HH22 |
H2 |
||
4jdw | 1 | P50440 | 99.76 | 0.0 |
X-RAY |
1998-01-28 | ARG | A:413 | A:413 | 48.0 | 0.213 | E | -142.8 | 128.0 | 48.0 | 0.213 | 0.0 |
HOH |
2.639 |
HH12 |
O |
||
1jdx | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:376 | A:413 | 49.0 | 0.218 | E | -144.8 | 125.7 | 49.0 | 0.218 | 0.0 |
HOH |
3.166 |
HH22 |
H1 |
||
5jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:376 | A:413 | 51.0 | 0.227 | E | -142.3 | 127.6 | 51.0 | 0.227 | 0.0 |
HOH |
2.758 |
HH12 |
H1 |
||
6jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:376 | A:413 | 49.0 | 0.218 | E | -143.9 | 125.5 | 49.0 | 0.218 | 0.0 |
HOH |
3.391 |
HH21 |
O |
||
7jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:376 | A:413 | 50.0 | 0.222 | E | -144.9 | 125.4 | 50.0 | 0.222 | 0.0 |
HOH |
3.416 |
HH21 |
H2 |
||
8jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:376 | A:413 | 49.0 | 0.218 | E | -142.6 | 123.5 | 49.0 | 0.218 | 0.0 |
HOH |
3.078 |
HH12 |
O |
||
9jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:376 | A:413 | 51.0 | 0.227 | E | -142.5 | 127.2 | 51.0 | 0.227 | 0.0 |
HOH |
2.725 |
HH12 |
H2 |
||
2jdx | 1 | P50440 | 99.74 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:375 | A:413 | 49.0 | 0.218 | E | -146.1 | 130.6 | 49.0 | 0.218 | 0.0 |
HOH |
4.526 |
HH12 |
H1 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p50440-f1 | 1 | P50440 | 100.0 | 0.0 | ARG | A:413 | A:413 | 47.0 | 0.209 | E | -136.3 | 124.7 |