Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 45654342 . G A CCDS10122.1:NM_001482.2:c.1237Cgg>Tgg_NP_001473.1:p.413R>W Homo sapiens glycine amidinotransferase (GATM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:413 A:413 48.0 0.213 E -141.6 125.2 48.0 0.213 0.0 HOH
 1.877
 HH21
 H2
2jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:413 A:413 47.0 0.209 E -138.8 123.4 47.0 0.209 0.0 HOH
 2.229
 HH21
 O
3jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:413 A:413 51.0 0.227 E -142.0 128.0 51.0 0.227 0.0 HOH
 2.501
 HH22
 H2
4jdw 1 P50440 99.76 0.0 X-RAY
 1998-01-28 ARG A:413 A:413 48.0 0.213 E -142.8 128.0 48.0 0.213 0.0 HOH
 2.639
 HH12
 O
1jdx 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:376 A:413 49.0 0.218 E -144.8 125.7 49.0 0.218 0.0 HOH
 3.166
 HH22
 H1
5jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:376 A:413 51.0 0.227 E -142.3 127.6 51.0 0.227 0.0 HOH
 2.758
 HH12
 H1
6jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:376 A:413 49.0 0.218 E -143.9 125.5 49.0 0.218 0.0 HOH
 3.391
 HH21
 O
7jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:376 A:413 50.0 0.222 E -144.9 125.4 50.0 0.222 0.0 HOH
 3.416
 HH21
 H2
8jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:376 A:413 49.0 0.218 E -142.6 123.5 49.0 0.218 0.0 HOH
 3.078
 HH12
 O
9jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:376 A:413 51.0 0.227 E -142.5 127.2 51.0 0.227 0.0 HOH
 2.725
 HH12
 H2
2jdx 1 P50440 99.74 0.0 X-RAY
 1999-02-09 ARG A:375 A:413 49.0 0.218 E -146.1 130.6 49.0 0.218 0.0 HOH
 4.526
 HH12
 H1

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50440-f1 1 P50440 100.0 0.0 ARG A:413 A:413 47.0 0.209 E -136.3 124.7