Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 45658257 . C A CCDS10122.1:NM_001482.2:c.965cGa>cTa_NP_001473.1:p.322R>L Homo sapiens glycine amidinotransferase (GATM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:322 A:322 15.0 0.067 S -128.1 70.5 15.0 0.067 0.0 BME
HOH
 8.928
1.620
 HH12
HE
 C1
H1
2jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:322 A:322 13.0 0.058 S -134.4 70.9 13.0 0.058 0.0 HOH
 1.654
 HE
 H1
3jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:322 A:322 19.0 0.084 S -128.2 72.4 19.0 0.084 0.0 ORN
HOH
 1.983
1.792
 HH12
O
 O
H2
4jdw 1 P50440 99.76 0.0 X-RAY
 1998-01-28 ARG A:322 A:322 19.0 0.084 S -123.4 70.6 19.0 0.084 0.0 ARG
HOH
 2.090
1.719
 HH12
O
 OXT
H1
1jdx 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:285 A:322 21.0 0.093 S -127.2 73.4 21.0 0.093 0.0 NVA
HOH
 1.985
1.687
 HH12
HE
 O
H1
5jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:285 A:322 15.0 0.067 S -126.6 66.5 15.0 0.067 0.0 GLY
HOH
 5.107
1.775
 HH12
HH12
 H2
H2
6jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:285 A:322 13.0 0.058 S -125.3 63.0 13.0 0.058 0.0 ABU
HOH
 2.387
1.811
 HH12
O
 OE2
H1
7jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:285 A:322 14.0 0.062 S -128.7 67.9 14.0 0.062 0.0 DAV
HOH
 2.419
2.677
 HH12
O
 OT2
O
8jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:285 A:322 22.0 0.098 S -125.8 71.1 22.0 0.098 0.0 ALA
HOH
 1.936
1.859
 HH12
O
 O
H2
9jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:285 A:322 20.0 0.089 S -127.0 73.2 20.0 0.089 0.0 ABA
HOH
 2.067
2.016
 HH12
O
 OXT
H1
2jdx 1 P50440 99.74 0.0 X-RAY
 1999-02-09 ARG A:284 A:322 12.0 0.053 S -124.4 66.4 12.0 0.053 0.0 HOH
 5.075
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50440-f1 1 P50440 100.0 0.0 ARG A:322 A:322 11.0 0.049 S -125.0 60.9