Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr15 | 45660326 | . | C | A | CCDS10122.1:NM_001482.2:c.617cGt>cTt_NP_001473.1:p.206R>L | Homo sapiens glycine amidinotransferase (GATM), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1998-01-28 | ARG | A:206 | A:206 | 115.0 | 0.511 | T | -88.6 | 10.2 | 115.0 | 0.511 | 0.0 |
HOH |
1.973 |
HH22 |
O |
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2jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1998-01-28 | ARG | A:206 | A:206 | 119.0 | 0.529 | T | -86.2 | 12.1 | 119.0 | 0.529 | 0.0 |
HOH |
1.586 |
HH12 |
H1 |
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3jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1998-01-28 | ARG | A:206 | A:206 | 111.0 | 0.493 | T | -90.2 | 14.8 | 111.0 | 0.493 | 0.0 |
HOH |
1.874 |
HH22 |
H1 |
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4jdw | 1 | P50440 | 99.76 | 0.0 |
X-RAY |
1998-01-28 | ARG | A:206 | A:206 | 114.0 | 0.507 | T | -87.5 | 8.7 | 114.0 | 0.507 | 0.0 |
HOH |
1.758 |
HH12 |
H1 |
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1jdx | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:169 | A:206 | 110.0 | 0.489 | T | -92.2 | 13.6 | 110.0 | 0.489 | 0.0 |
HOH |
1.686 |
HH22 |
H1 |
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5jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:169 | A:206 | 112.0 | 0.498 | T | -95.3 | 15.1 | 112.0 | 0.498 | 0.0 |
HOH |
1.916 |
HH11 |
H2 |
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6jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:169 | A:206 | 113.0 | 0.502 | T | -82.9 | 9.8 | 113.0 | 0.502 | 0.0 |
HOH |
1.881 |
HH11 |
H1 |
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7jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:169 | A:206 | 117.0 | 0.52 | T | -82.6 | 8.2 | 117.0 | 0.52 | 0.0 |
HOH |
1.954 |
HH22 |
O |
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8jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:169 | A:206 | 110.0 | 0.489 | T | -88.1 | 7.0 | 110.0 | 0.489 | 0.0 |
HOH |
2.053 |
HH21 |
O |
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9jdw | 1 | P50440 | 100.0 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:169 | A:206 | 108.0 | 0.48 | T | -94.3 | 14.3 | 108.0 | 0.48 | 0.0 |
HOH |
1.723 |
HH22 |
H1 |
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2jdx | 1 | P50440 | 99.74 | 0.0 |
X-RAY |
1999-02-09 | ARG | A:169 | A:206 | 114.0 | 0.507 | T | -85.1 | 7.7 | 114.0 | 0.507 | 0.0 |
HOH |
2.042 |
HH22 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p50440-f1 | 1 | P50440 | 100.0 | 0.0 | ARG | A:206 | A:206 | 100.0 | 0.444 | T | -96.0 | 16.0 |