Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 45660377 . C A CCDS10122.1:NM_001482.2:c.566cGc>cTc_NP_001473.1:p.189R>L Homo sapiens glycine amidinotransferase (GATM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:189 A:189 0.0 0.0 G -120.3 13.4 0.0 0.0 0.0 BME
HOH
 5.069
2.023
 HH12
HH11
 O1
O
2jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:189 A:189 1.0 0.004 G -122.3 11.7 1.0 0.004 0.0 HOH
 1.886
 O
 H1
3jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 ARG A:189 A:189 0.0 0.0 G -122.5 11.0 0.0 0.0 0.0 ORN
HOH
 5.616
1.465
 HH12
HH11
 HE2
H2
4jdw 1 P50440 99.76 0.0 X-RAY
 1998-01-28 ARG A:189 A:189 1.0 0.004 G -118.5 12.1 1.0 0.004 0.0 ARG
HOH
 4.573
2.084
 HH22
HH11
 HH12
O
1jdx 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:152 A:189 1.0 0.004 G -120.7 14.1 1.0 0.004 0.0 NVA
HOH
 8.055
1.967
 HH12
HH11
 H
O
5jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:152 A:189 1.0 0.004 G -121.1 19.0 1.0 0.004 0.0 GLY
HOH
 5.573
1.982
 HH12
HH11
 OXT
O
6jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:152 A:189 0.0 0.0 G -115.2 13.3 0.0 0.0 0.0 ABU
HOH
 6.113
1.933
 HH12
HH11
 HN3
O
7jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:152 A:189 0.0 0.0 G -121.2 13.7 0.0 0.0 0.0 DAV
HOH
 5.139
1.794
 HH12
HH11
 HT1
H1
8jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:152 A:189 0.0 0.0 G -119.6 11.4 0.0 0.0 0.0 ALA
HOH
 8.186
2.017
 HH12
HH11
 H3
O
9jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 ARG A:152 A:189 0.0 0.0 G -118.5 11.7 0.0 0.0 0.0 ABA
HOH
 7.842
1.834
 HH12
HH11
 HN2
O
2jdx 1 P50440 99.74 0.0 X-RAY
 1999-02-09 ARG A:152 A:189 8.0 0.036 G -113.9 12.2 8.0 0.036 0.0 HOH
 1.993
 HH11
 H2

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50440-f1 1 P50440 100.0 0.0 ARG A:189 A:189 4.0 0.018 G -105.0 5.5