Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 45668871 . C A CCDS10122.1:NM_001482.2:c.216tgG>tgT_NP_001473.1:p.72W>C Homo sapiens glycine amidinotransferase (GATM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 TRP A:72 A:72 0.0 0.0 S -135.6 -17.1 0.0 0.0 0.0 HOH
 1.919
 HE1
 O
2jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 TRP A:72 A:72 1.0 0.004 S -133.8 -14.9 1.0 0.004 0.0 HOH
 1.901
 HE1
 O
3jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 TRP A:72 A:72 0.0 0.0 S -131.4 -16.1 0.0 0.0 0.0 HOH
 1.990
 HE1
 O
4jdw 1 P50440 99.76 0.0 X-RAY
 1998-01-28 TRP A:72 A:72 1.0 0.004 S -122.3 -23.4 1.0 0.004 0.0 HOH
 1.924
 HE1
 O
1jdx 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TRP A:35 A:72 1.0 0.004 S -126.7 -19.1 1.0 0.004 0.0 HOH
 1.887
 HE1
 O
5jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TRP A:35 A:72 1.0 0.004 S -128.5 -15.4 1.0 0.004 0.0 HOH
 1.840
 HE1
 O
6jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TRP A:35 A:72 0.0 0.0 S -122.9 -22.9 0.0 0.0 0.0 HOH
 1.858
 HE1
 O
7jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TRP A:35 A:72 0.0 0.0 S -125.6 -18.9 0.0 0.0 0.0 HOH
 1.787
 HE1
 O
8jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TRP A:35 A:72 1.0 0.004 -130.3 -18.8 1.0 0.004 0.0 HOH
 2.064
 HE1
 O
9jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TRP A:35 A:72 1.0 0.004 S -124.5 -19.3 1.0 0.004 0.0 HOH
 2.071
 HE1
 O
2jdx 1 P50440 99.74 0.0 X-RAY
 1999-02-09 TRP A:35 A:72 1.0 0.004 S -122.4 -19.0 1.0 0.004 0.0 HOH
 3.988
 N
 H2

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50440-f1 1 P50440 100.0 0.0 TRP A:72 A:72 0.0 0.0 S -134.7 -14.6