Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 45668880 . G A CCDS10122.1:NM_001482.2:c.207taC>taT_NP_001473.1:p.69Y>Y Homo sapiens glycine amidinotransferase (GATM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 TYR A:69 A:69 40.0 0.174 -107.2 -9.2 40.0 0.174 0.0 HOH
 1.916
 H
 O
2jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 TYR A:69 A:69 40.0 0.174 -107.0 -13.2 40.0 0.174 0.0 HOH
 1.885
 O
 H1
3jdw 1 P50440 100.0 0.0 X-RAY
 1998-01-28 TYR A:69 A:69 39.0 0.17 -106.0 -10.4 39.0 0.17 0.0 HOH
 1.847
 O
 H1
4jdw 1 P50440 99.76 0.0 X-RAY
 1998-01-28 TYR A:69 A:69 40.0 0.174 -109.3 -7.0 40.0 0.174 0.0 HOH
 1.933
 H
 O
1jdx 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TYR A:32 A:69 39.0 0.17 -107.7 -9.7 39.0 0.17 0.0 HOH
 1.985
 H
 O
5jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TYR A:32 A:69 42.0 0.183 -103.0 -11.4 42.0 0.183 0.0 HOH
 1.311
 H
 H1
6jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TYR A:32 A:69 39.0 0.17 -104.2 -10.4 39.0 0.17 0.0 HOH
 1.196
 H
 H1
7jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TYR A:32 A:69 39.0 0.17 -110.0 -8.8 39.0 0.17 0.0 HOH
 2.160
 H
 O
8jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TYR A:32 A:69 39.0 0.17 -112.2 -6.4 39.0 0.17 0.0 HOH
 1.129
 H
 H1
9jdw 1 P50440 100.0 0.0 X-RAY
 1999-02-09 TYR A:32 A:69 40.0 0.174 -109.4 -5.2 40.0 0.174 0.0 HOH
 1.143
 H
 H1
2jdx 1 P50440 99.74 0.0 X-RAY
 1999-02-09 TYR A:32 A:69 41.0 0.178 -107.5 -13.4 41.0 0.178 0.0 HOH
 1.783
 H
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p50440-f1 1 P50440 100.0 0.0 TYR A:69 A:69 28.0 0.122 -112.2 -17.1