Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 63638886 . C A CCDS10185.1:NM_001218.3:c.129tgG>tgT_NP_001209.1:p.43W>C Homo sapiens carbonic anhydrase XII (CA12), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1jcz 1 O43570 99.62 0.0 X-RAY
2001-08-17 TRP A:15 A:16 5.0 0.02 H -54.8 -40.6 5.0 0.02 0.0 ZN
ACY
HOH
9.384
8.441
3.230
CH2
CZ3
O
ZN
OXT
O
TRP B:15 B:16 5.0 0.02 H -54.6 -40.4 5.0 0.02 0.0 ZN
ACY
HOH
9.353
8.456
3.296
CH2
CZ3
N
ZN
OXT
O
1jd0 1 O43570 99.62 0.0 X-RAY
2001-08-17 TRP A:15 A:16 5.0 0.02 H -54.0 -39.0 5.0 0.02 0.0 ZN
AZM
HOH
9.607
8.468
3.293
CH2
CH2
N
ZN
N1
O
TRP B:15 B:16 5.0 0.02 H -54.0 -39.1 5.0 0.02 0.0 ZN
AZM
HOH
9.610
8.406
3.301
CH2
CH2
N
ZN
N1
O
6qn0 1 O43570 99.62 0.0 X-RAY
2020-02-26 TRP A:15 A:16 3.0 0.012 G -52.2 -45.3 3.0 0.012 0.0 ZN
J8Q
HOH
9.596
8.577
3.299
CH2
CH2
N
ZN
N1
O
TRP B:15 B:16 4.0 0.016 G -50.4 -38.5 4.0 0.016 0.0 ZN
J8Q
HOH
9.462
8.316
3.432
CH2
CH2
CD1
ZN
N1
O
TRP C:15 C:16 3.0 0.012 G -53.1 -44.8 NA NA NA
TRP D:15 D:16 5.0 0.02 H -57.8 -37.1 NA NA NA
6qng 1 O43570 99.62 0.0 X-RAY
2020-03-04 TRP A:15 A:16 4.0 0.016 G -54.8 -40.6 4.0 0.016 0.0 ZN
J95
HOH
9.640
8.636
3.346
CH2
CH2
O
ZN
N1
O
TRP B:15 B:16 2.0 0.008 G -58.0 -37.5 2.0 0.008 0.0 ZN
J95
HOH
9.630
8.599
3.228
CH2
CH2
N
ZN
N1
O
TRP C:15 C:16 4.0 0.016 H -55.8 -38.4 NA NA NA
TRP D:15 D:16 4.0 0.016 H -52.9 -40.3 NA NA NA
6qnl 1 O43570 99.62 0.0 X-RAY
2020-03-04 TRP A:15 A:16 4.0 0.016 H -54.8 -37.0 4.0 0.016 0.0 ZN
J92
HOH
9.520
8.520
3.306
CH2
CH2
O
ZN
N1
O
TRP B:15 B:16 4.0 0.016 G -56.9 -40.4 4.0 0.016 0.0 ZN
J92
HOH
9.535
8.578
3.275
CH2
CH2
N
ZN
N1
O
TRP C:15 C:16 3.0 0.012 G -56.1 -38.6 NA NA NA
TRP D:15 D:16 4.0 0.016 H -55.3 -38.2 NA NA NA
4ht2 1 O43570 100.0 0.0 X-RAY
2013-04-10 TRP A:15 A:15 4.0 0.016 H -60.1 -36.0 4.0 0.016 0.0 ZN
V50
PEG
EDO
HOH
9.494
7.232
8.553
8.185
3.290
CH2
CZ3
CH2
CH2
N
ZN
F11
O4
C2
O
TRP B:15 B:15 5.0 0.02 H -57.4 -31.4 NA NA NA
TRP C:15 C:15 0.0 0.0 H -62.8 -33.7 NA NA NA
TRP D:15 D:15 4.0 0.016 H -56.0 -36.4 NA NA NA
4kp5 1 O43570 100.0 0.0 X-RAY
2013-11-06 TRP A:15 A:15 4.0 0.016 G -66.2 -31.0 4.0 0.016 0.0 ZN
E1F
EDO
HOH
9.502
8.489
8.732
3.345
CH2
CH2
CH2
N
ZN
N19
C1
O
TRP B:15 B:15 4.0 0.016 H -61.8 -30.8 4.0 0.016 0.0 ZN
E1F
EDO
HOH
9.549
8.567
8.817
3.271
CH2
CH2
CH2
N
ZN
N19
C1
O
TRP C:15 C:15 5.0 0.02 G -51.8 -38.8 NA NA NA
TRP D:15 D:15 5.0 0.02 G -62.3 -30.2 NA NA NA
4kp8 1 O43570 100.0 0.0 X-RAY
2013-11-06 TRP A:15 A:15 4.0 0.016 H -53.9 -40.9 4.0 0.016 0.0 ZN
E1G
HOH
9.489
8.432
3.291
CH2
CH2
N
ZN
N20
O
TRP B:15 B:15 5.0 0.02 H -49.8 -40.7 5.0 0.02 0.0 ZN
E1G
PEG
HOH
9.698
8.425
7.718
3.403
CH2
CZ3
CH2
N
ZN
C5
C1
O
TRP C:15 C:15 1.0 0.004 H -47.3 -41.4 NA NA NA
TRP D:15 D:15 5.0 0.02 H -57.2 -35.8 NA NA NA
4q0l 1 O43570 100.0 0.0 X-RAY
2015-01-28 TRP A:15 A:15 5.0 0.02 H -50.7 -44.1 5.0 0.02 0.0 ZN
V14
HOH
9.787
7.818
3.553
CH2
CH2
N
ZN
F12
O
TRP B:15 B:15 2.0 0.008 H -53.1 -35.7 2.0 0.008 0.0 ZN
V14
HOH
9.390
7.590
3.196
CH2
CH2
N
ZN
F12
O
TRP C:15 C:15 4.0 0.016 G -51.3 -43.3 NA NA NA
TRP D:15 D:15 4.0 0.016 H -49.8 -42.5 NA NA NA
4qj0 1 O43570 100.0 0.0 X-RAY
2015-04-15 TRP A:15 A:15 4.0 0.016 H -56.5 -36.3 4.0 0.016 0.0 ZN
WWX
HOH
9.585
8.236
3.350
CH2
CH2
N
ZN
C28
O
TRP B:15 B:15 4.0 0.016 G -58.2 -37.2 4.0 0.016 0.0 ZN
WWX
HOH
9.636
7.801
3.316
CH2
CH2
N
ZN
F11
O
TRP C:15 C:15 5.0 0.02 G -50.4 -38.3 NA NA NA
TRP D:15 D:15 5.0 0.02 G -58.6 -32.9 NA NA NA
4qjo 1 O43570 100.0 0.0 X-RAY
2015-04-15 TRP A:15 A:15 3.0 0.012 H -55.1 -34.7 3.0 0.012 0.0 ZN
V1F
HOH
9.522
7.979
3.296
CH2
CH2
N
ZN
F12
O
TRP B:15 B:15 4.0 0.016 H -53.7 -37.0 4.0 0.016 0.0 ZN
V1F
HOH
9.714
7.215
3.321
CH2
CZ3
N
ZN
F12
O
TRP C:15 C:15 0.0 0.0 H -55.0 -39.1 NA NA NA
TRP D:15 D:15 4.0 0.016 H -58.8 -35.1 NA NA NA
4qjw 1 O43570 100.0 0.0 X-RAY
2015-04-15 TRP A:15 A:15 4.0 0.016 H -53.1 -39.2 4.0 0.016 0.0 ZN
WWO
HOH
9.499
7.805
3.352
CH2
CH2
N
ZN
F12
O
TRP B:15 B:15 5.0 0.02 H -55.0 -33.1 5.0 0.02 0.0 ZN
WWO
HOH
9.702
7.857
3.347
CH2
CH2
N
ZN
F12
O
TRP C:15 C:15 2.0 0.008 H -60.0 -33.9 NA NA NA
TRP D:15 D:15 4.0 0.016 H -60.3 -33.4 NA NA NA
4ww8 1 O43570 100.0 0.0 X-RAY
2015-07-01 TRP A:15 A:15 4.0 0.016 H -62.6 -31.9 4.0 0.016 0.0 ZN
EDO
VD9
HOH
9.605
8.693
8.487
3.398
CH2
CH2
CH2
N
ZN
O1
N3
O
TRP B:15 B:15 4.0 0.016 H -60.8 -33.3 4.0 0.016 0.0 ZN
EDO
VD9
HOH
9.667
8.792
8.625
3.295
CH2
CH2
CZ3
N
ZN
O2
C10
O
TRP C:15 C:15 6.0 0.024 G -49.9 -38.3 NA NA NA
TRP D:15 D:15 4.0 0.016 G -58.6 -31.7 NA NA NA
5ll5 1 O43570 100.0 0.0 X-RAY
2017-08-16 TRP A:15 A:15 4.0 0.016 H -64.3 -32.1 4.0 0.016 0.0 ZN
6YH
EDO
HOH
9.503
8.398
8.528
3.363
CH2
CZ3
CH2
N
ZN
C2
O2
O
TRP B:15 B:15 5.0 0.02 G -54.5 -37.9 5.0 0.02 0.0 ZN
6YH
EDO
HOH
9.629
8.504
8.698
3.338
CH2
CZ3
CH2
N
ZN
C6
O2
O
TRP C:15 C:15 5.0 0.02 H -52.0 -38.9 NA NA NA
TRP D:15 D:15 4.0 0.016 H -56.8 -35.3 NA NA NA
5ll9 1 O43570 100.0 0.0 X-RAY
2017-08-16 TRP A:15 A:15 4.0 0.016 H -58.5 -31.6 4.0 0.016 0.0 ZN
6YQ
EDO
HOH
9.452
8.525
8.665
3.341
CH2
CH2
CH2
N
ZN
N10
C1
O
TRP B:15 B:15 4.0 0.016 G -60.1 -31.9 4.0 0.016 0.0 ZN
6YQ
EDO
HOH
9.538
8.586
8.808
3.348
CH2
CH2
CH2
N
ZN
N10
O2
O
TRP C:15 C:15 6.0 0.024 H -48.3 -39.7 NA NA NA
TRP D:15 D:15 4.0 0.016 G -58.5 -34.8 NA NA NA
5llo 1 O43570 100.0 0.0 X-RAY
2017-08-16 TRP A:15 A:15 4.0 0.016 H -59.6 -33.1 4.0 0.016 0.0 ZN
5EF
HOH
9.655
7.831
3.314
CH2
CH2
N
ZN
F11
O
TRP B:15 B:15 4.0 0.016 G -54.9 -39.7 4.0 0.016 0.0 ZN
5EF
HOH
9.709
7.912
3.367
CH2
CH2
N
ZN
F11
O
TRP C:15 C:15 6.0 0.024 H -44.1 -39.0 NA NA NA
TRP D:15 D:15 4.0 0.016 G -60.4 -31.3 NA NA NA
5llp 1 O43570 100.0 0.0 X-RAY
2017-08-16 TRP A:15 A:15 4.0 0.016 H -58.2 -34.7 4.0 0.016 0.0 ZN
6Z9
HOH
9.687
7.829
3.288
CH2
CH2
O
ZN
F5
O
TRP B:15 B:15 4.0 0.016 G -56.9 -37.7 4.0 0.016 0.0 ZN
6Z9
HOH
9.740
7.935
3.363
CH2
CH2
N
ZN
F5
O
TRP C:15 C:15 5.0 0.02 G -51.3 -36.5 NA NA NA
TRP D:15 D:15 4.0 0.016 G -62.1 -34.6 NA NA NA
5msa 1 O43570 100.0 0.0 X-RAY
2018-01-17 TRP A:15 A:15 4.0 0.016 H -58.5 -32.6 4.0 0.016 0.0 ZN
3TV
HOH
9.575
8.484
3.347
CH2
CH2
N
ZN
N2
O
TRP B:15 B:15 4.0 0.016 G -52.9 -38.6 4.0 0.016 0.0 ZN
3TV
HOH
9.699
7.329
3.342
CH2
CZ3
N
ZN
F17
O
TRP C:15 C:15 6.0 0.024 G -50.1 -38.6 NA NA NA
TRP D:15 D:15 4.0 0.016 G -54.4 -36.9 NA NA NA
5msb 1 O43570 100.0 0.0 X-RAY
2018-01-17 TRP A:15 A:15 5.0 0.02 H -55.4 -33.4 5.0 0.02 0.0 ZN
V13
HOH
9.522
8.498
3.328
CH2
CH2
N
ZN
N10
O
TRP B:15 B:15 4.0 0.016 H -60.9 -35.1 4.0 0.016 0.0 ZN
V13
HOH
9.637
7.345
3.260
CH2
CZ3
N
ZN
F13
O
TRP C:15 C:15 5.0 0.02 H -48.5 -40.8 NA NA NA
TRP D:15 D:15 4.0 0.016 G -62.6 -36.6 NA NA NA
6g5l 1 O43570 100.0 0.0 X-RAY
2019-03-13 TRP A:15 A:15 4.0 0.016 H -55.8 -38.0 4.0 0.016 0.0 ZN
EM5
HOH
9.578
8.198
3.341
CH2
CH2
N
ZN
C16
O
TRP B:15 B:15 4.0 0.016 G -55.9 -38.8 4.0 0.016 0.0 ZN
EM5
HOH
9.604
8.252
3.293
CH2
CH2
N
ZN
C16
O
TRP C:15 C:15 5.0 0.02 H -56.2 -39.7 NA NA NA
TRP D:15 D:15 4.0 0.016 G -55.2 -38.9 NA NA NA
6g7a 1 O43570 100.0 0.0 X-RAY
2019-03-13 TRP A:15 A:15 4.0 0.016 H -58.6 -33.0 4.0 0.016 0.0 ZN
EOQ
HOH
9.487
8.211
3.378
CH2
CH2
N
ZN
C16
O
TRP B:15 B:15 4.0 0.016 G -58.8 -35.2 4.0 0.016 0.0 ZN
EOQ
HOH
9.558
8.591
3.298
CH2
CH2
N
ZN
N5
O
TRP C:15 C:15 5.0 0.02 G -57.5 -32.3 NA NA NA
TRP D:15 D:15 3.0 0.012 G -59.7 -34.6 NA NA NA
6r6y 1 O43570 100.0 0.0 X-RAY
2020-04-08 TRP A:15 A:15 4.0 0.016 H -57.7 -33.1 4.0 0.016 0.0 ZN
EA3
HOH
9.536
8.505
3.334
CH2
CH2
N
ZN
N1
O
TRP B:15 B:15 4.0 0.016 G -58.0 -35.3 4.0 0.016 0.0 ZN
EA3
HOH
9.615
8.630
3.279
CH2
CH2
N
ZN
N1
O
TRP C:15 C:15 5.0 0.02 H -56.9 -35.3 NA NA NA
TRP D:15 D:15 3.0 0.012 G -57.2 -35.4 NA NA NA
6r71 1 O43570 100.0 0.0 X-RAY
2020-04-08 TRP A:15 A:15 3.0 0.012 G -51.5 -42.3 3.0 0.012 0.0 ZN
EDO
JTW
HOH
9.461
7.822
8.170
3.345
CH2
N
CH2
N
ZN
O2
C16
O
TRP B:15 B:15 5.0 0.02 G -53.8 -38.0 5.0 0.02 0.0 EDO
ZN
JTW
HOH
7.085
9.461
8.374
3.380
C
CH2
CH2
N
O1
ZN
N1
O
6t5p 1 O43570 100.0 0.0 X-RAY
2020-10-14 TRP A:15 A:15 4.0 0.016 H -52.0 -37.4 4.0 0.016 0.0 ZN
VD8
HOH
9.520
8.137
3.357
CH2
CH2
N
ZN
N8
O
TRP B:15 B:15 5.0 0.02 G -59.3 -37.3 5.0 0.02 0.0 ZN
VD8
HOH
9.585
8.382
3.282
CH2
CH2
N
ZN
N8
O
TRP C:15 C:15 5.0 0.02 H -56.9 -35.3 NA NA NA
TRP D:15 D:15 5.0 0.02 G -56.2 -36.6 NA NA NA
6t5q 1 O43570 100.0 0.0 X-RAY
2020-10-14 TRP A:15 A:15 4.0 0.016 H -56.1 -39.4 4.0 0.016 0.0 ZN
MKQ
HOH
9.633
8.337
3.340
CH2
CH2
N
ZN
N1
O
TRP B:15 B:15 4.0 0.016 H -56.3 -36.4 4.0 0.016 0.0 ZN
MKQ
EDO
HOH
9.594
8.234
5.689
3.259
CH2
CH2
N
N
ZN
N1
C2
O
TRP C:15 C:15 4.0 0.016 H -55.5 -35.0 NA NA NA
TRP D:15 D:15 4.0 0.016 H -51.6 -38.7 NA NA NA
7puu 1 O43570 100.0 0.0 X-RAY
2022-01-12 TRP A:15 A:15 4.0 0.016 H -58.1 -33.8 4.0 0.016 0.0 ZN
84O
EDO
HOH
9.599
8.300
7.300
3.357
CH2
CH2
O
N
ZN
C10
O2
O
TRP B:15 B:15 4.0 0.016 G -57.0 -39.1 4.0 0.016 0.0 ZN
84O
HOH
9.632
8.305
3.286
CH2
CH2
N
ZN
C10
O
TRP C:15 C:15 4.0 0.016 H -56.5 -35.2 NA NA NA
TRP D:15 D:15 4.0 0.016 G -56.7 -36.5 NA NA NA
7puv 1 O43570 100.0 0.0 X-RAY
2022-01-12 TRP A:15 A:15 5.0 0.02 H -58.6 -31.8 5.0 0.02 0.0 ZN
84Z
HOH
9.534
8.571
3.316
CH2
CH2
O
ZN
N10
O
TRP B:15 B:15 4.0 0.016 G -58.2 -38.2 4.0 0.016 0.0 ZN
84Z
HOH
9.629
8.640
3.331
CH2
CH2
N
ZN
N10
O
TRP C:15 C:15 5.0 0.02 H -58.2 -35.4 NA NA NA
TRP D:15 D:15 4.0 0.016 G -59.1 -36.5 NA NA NA
7puw 1 O43570 100.0 0.0 X-RAY
2022-01-12 TRP A:15 A:15 4.0 0.016 H -57.2 -33.8 4.0 0.016 0.0 ZN
84I
HOH
9.523
7.244
3.331
CH2
CH2
N
ZN
C15
O
TRP B:15 B:15 4.0 0.016 G -54.3 -38.5 4.0 0.016 0.0 ZN
84I
HOH
9.594
7.213
3.299
CH2
CH2
N
ZN
C15
O
TRP C:15 C:15 5.0 0.02 H -52.1 -38.3 NA NA NA
TRP D:15 D:15 4.0 0.016 G -57.1 -37.3 NA NA NA
6rps 1 O43570 96.7 0.0 X-RAY
2019-11-13 TRP A:14 A:16 5.0 0.02 H -52.1 -35.7 5.0 0.02 0.0 ZN
ACT
SO4
HOH
9.724
8.539
8.316
5.680
CH2
CZ3
O
CZ3
ZN
O
O3
O
TRP B:14 B:16 4.0 0.016 H -52.5 -36.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43570-f1 1 O43570 100.0 0.0 TRP A:43 A:43 4.0 0.016 G -60.5 -39.4