Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr15 67479787 . A C CCDS10222.1:NM_005902.3:c.1094cAg>cCg_NP_005893.1:p.365Q>P Homo sapiens SMAD family member 3 (SMAD3), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1khx 1 Q15796 92.51 1e-157 X-RAY
 2002-02-06 GLN A:167 A:407 104.0 0.578 G -72.8 -9.5 71.0 0.394 0.184 A:Q15796:0.183
 HOH
 3.276
 OE1
 O
6zvq 1 Q15796 92.51 1e-157 X-RAY
 2021-06-09 GLN A:167 A:407 97.0 0.539 G -64.4 -13.2 62.0 0.344 0.195 A:Q15796:0.194
 SO4
TAR
GOL
HOH
 8.842
4.785
7.156
3.463
 N
O
OE1
CB
 O2
O3
HO3
O
1mk2 1 P84022 100.0 4e-154 X-RAY
 2002-10-16 GLN A:146 A:364 98.0 0.544 G -69.5 -31.6 98.0 0.544 0.0 ACY
ACY
 7.379
9.534
 OE1
OE1
 CH3
CH3
6m64 1 Q15796 96.1 6e-149 X-RAY
 2020-11-25 GLN A:148 A:407 82.0 0.456 G -62.0 -16.9 71.0 0.394 0.062 E:Q15796:0.061
 HOH
 2.886
 O
 O
GLN C:148 C:407 70.0 0.389 G -62.8 -16.5 68.0 0.378 0.011 A:Q15796:0.011
 HOH
 2.811
 O
 O
GLN E:148 E:407 65.0 0.361 G -69.2 -14.6 56.0 0.311 0.05 C:Q15796:0.05
 HOH
 2.808
 O
 O
7co1 1 Q15796 96.1 6e-149 X-RAY
 2020-11-25 GLN A:148 A:407 103.0 0.572 G -76.0 0.4 88.0 0.489 0.083 E:Q15796:0.083
GLN C:148 C:407 104.0 0.578 G -74.5 0.6 87.0 0.483 0.095 A:Q15796:0.094
GLN E:148 E:407 107.0 0.594 G -76.6 0.5 87.0 0.483 0.111 C:Q15796:0.111
1u7f 1 P84022 100.0 2e-147 X-RAY
 2004-09-28 GLN A:138 A:365 97.0 0.539 G -73.2 -0.8 82.0 0.456 0.083 B:Q13485:0.083
 HOH
 4.527
 NE2
 O
GLN C:138 C:365 110.0 0.611 G -68.5 -7.7 104.0 0.578 0.033 A:P84022:0.033
 HOH
 2.575
 O
 O
5xoc 1 P84022 100.0 2e-147 X-RAY
 2018-03-28 GLN A:148 A:365 126.0 0.7 G -65.9 -18.4 15.0 0.083 0.617 B:P0AA25+O75593:0.544
A:P84022:0.128
1mjs 1 P84022 100.0 9e-147 X-RAY
 2002-10-16 GLN A:137 A:364 89.0 0.494 G -59.7 -25.6 89.0 0.494 0.0 HOH
 2.907
 O
 O
1u7v 1 Q15796 96.97 6e-145 X-RAY
 2004-09-28 GLN A:138 A:407 81.0 0.45 G -76.4 -0.4 77.0 0.428 0.022 C:Q13485:0.022
GLN B:138 C:407 104.0 0.578 G -77.6 -9.6 97.0 0.539 0.039 A:Q15796:0.039
5xod 1 Q15796 97.46 3e-144 X-RAY
 2018-03-28 GLN A:148 A:407 100.0 0.556 G -82.9 4.7 60.0 0.333 0.223 A:Q15796:0.222
 HOH
 6.734
 O
 O
5zoj 1 Q15796 97.46 4e-144 X-RAY
 2018-10-10 GLN A:149 A:407 86.0 0.478 G -64.3 -14.0 83.0 0.461 0.017 C:Q15796:0.017
GLN B:149 B:407 84.0 0.467 G -61.2 -11.9 67.0 0.372 0.095 A:Q15796:0.094
GLN C:149 C:407 85.0 0.472 G -60.5 -11.5 73.0 0.406 0.066 B:Q15796:0.067
1dev 1 Q15796 97.45 9e-144 X-RAY
 2000-01-21 GLN A:147 A:407 100.0 0.556 H -60.6 -29.7 100.0 0.556 0.0
GLN C:147 C:407 103.0 0.572 G -69.3 -10.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p84022-f1 1 P84022 100.0 0.0 GLN A:365 A:365 69.0 0.383 H -62.2 -25.3
af-q15796-f1 1 Q15796 83.73 0.0 GLN A:407 A:407 56.0 0.311 H -61.8 -25.2