Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 31004730 . C A CCDS10699.1:NM_052874.3:c.613Gag>Tag_NP_443106.1:p.205E>* Homo sapiens syntaxin 1B (STX1B), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3c98 2 P32851 83.15 8e-149 X-RAY
 2008-03-25 GLU B:218 B:206 82.0 0.432 H -58.1 -28.3 82.0 0.432 0.0
4jeh 2 P32851 85.6 6e-145 X-RAY
 2013-07-17 GLU B:183 B:206 74.0 0.389 H -65.9 -40.7 72.0 0.379 0.01 A:P61765:0.011
 HOH
 7.107
 OE1
 O
6mdm 3 P32851 82.03 3e-139 EM
 2018-09-19 GLU H:206 I:206 110.0 0.579 H -65.4 -36.3 7.0 0.037 0.542 G:P60881:0.542
6mdn 3 P32851 82.03 3e-139 EM
 2018-09-19 GLU H:206 I:206 110.0 0.579 H -63.3 -28.7 8.0 0.042 0.537 G:P60881:0.537
6ip1 2 P32851 82.14 3e-137 EM
 2019-04-24 GLU B:207 B:206 119.0 0.626 H -75.4 -26.8 6.0 0.032 0.594 E:A5D7S0:0.058
C:P60881:0.584
4jeu 2 P32851 81.4 4e-130 X-RAY
 2013-07-17 GLU B:205 B:206 62.0 0.326 H -64.3 -39.1 60.0 0.316 0.01 A:P61765:0.011
2m8r 1 P32851 85.85 2e-63 NMR
 2013-11-20 GLU A:27 A:206 93.0 0.489 H -57.2 -60.0 93.0 0.489 0.0
3hd7 2 P32851 85.85 2e-63 X-RAY
 2009-07-14 GLU B:27 B:206 91.0 0.479 H -59.0 -54.1 4.0 0.021 0.458 C:P60881:0.458
GLU F:27 F:206 87.0 0.458 H -58.8 -51.0 NA NA NA
3ipd 2 P32851 85.85 2e-63 X-RAY
 2009-09-01 GLU B:27 B:206 88.0 0.463 H -67.4 -39.4 3.0 0.016 0.447 C:P60881:0.447
GLU F:27 F:206 91.0 0.479 H -67.2 -39.4 NA NA NA
1sfc 2 P32851 89.02 6e-46 X-RAY
 1998-10-28 GLU B:27 B:206 91.0 0.479 H -59.9 -37.0 10.0 0.053 0.426 C:P60881:0.426
GLU F:27 F:206 94.0 0.495 H -71.9 -39.7 NA NA NA
GLU J:27 J:206 80.0 0.421 H -46.9 -38.2 NA NA NA
1jth 2 P32851 93.51 3e-45 X-RAY
 2001-11-28 GLU B:16 B:206 103.0 0.542 H -58.9 -38.0 9.0 0.047 0.495 C:P60881:0.495
 HOH
 4.882
 OE1
 O
GLU D:16 D:206 92.0 0.484 H -56.1 -39.0 5.0 0.026 0.458 A:P60881:0.458
 HOH
 2.475
 OE2
 O
1hvv 1 P32851 93.33 7e-44 X-RAY
 2001-01-31 GLU A:17 A:206 118.0 0.621 H -64.4 -44.0 24.0 0.126 0.495 C:P32851:0.495
 HOH
 3.065
 OE2
 O
GLU B:17 B:206 115.0 0.605 H -63.7 -37.6 115.0 0.605 0.0 HOH
 4.975
 CG
 O
GLU C:17 C:206 100.0 0.526 H -64.9 -52.9 13.0 0.068 0.458 A:P32851:0.458
 TAR
HOH
 6.735
6.387
 O
OE2
 O41
O
GLU D:17 D:206 112.0 0.589 H -65.9 -46.5 70.0 0.368 0.221 C:P32851:0.221
 HOH
 4.248
 OE1
 O
2n1t 2 P32851 91.67 4e-41 NMR
 2015-06-03 GLU B:19 B:206 99.0 0.521 H -59.7 -42.9 5.0 0.026 0.495 C:P60880:0.495
1urq 2 P32851 91.67 5e-41 X-RAY
 2004-08-26 GLU B:22 B:206 83.0 0.437 H -56.8 -39.2 11.0 0.058 0.379 C:P13795:0.379
 HOH
 5.148
 OE2
 O
5kj7 2 P32851 92.42 1e-36 X-RAY
 2016-10-19 GLU B:16 B:206 82.0 0.432 H -60.0 -41.5 7.0 0.037 0.395 C:P60881:0.395
GLU H:16 H:206 111.0 0.584 H -58.5 -40.5 NA NA NA
5kj8 2 P32851 92.42 1e-36 X-RAY
 2016-10-19 GLU B:16 B:206 87.0 0.458 H -66.8 -37.9 4.0 0.021 0.437 C:P60881:0.437
GLU H:16 H:206 121.0 0.637 H -66.8 -36.3 NA NA NA
6wvw 2 P32851 92.42 1e-36 X-RAY
 2021-03-17 GLU B:16 B:206 88.0 0.463 H -64.5 -39.1 13.0 0.068 0.395 C:P60881:0.395
 MPD
HOH
 9.199
4.905
 OE2
OE1
 H31
O
GLU F:16 F:206 85.0 0.447 H -64.8 -39.2 NA NA NA
3j96 4 P32851 92.42 1e-36 EM
 2015-01-28 GLU L:17 L:206 89.0 0.468 H -69.7 -59.6 1.0 0.005 0.463 M:None:0.463
G:P54921:0.016
3j97 4 P32851 92.42 1e-36 EM
 2015-01-28 GLU L:17 L:206 81.0 0.426 H -57.1 -36.0 10.0 0.053 0.373 M:None:0.258
G:P54921:0.132
3j98 4 P32851 92.42 1e-36 EM
 2015-01-28 GLU L:17 L:206 88.0 0.463 H -48.2 -44.8 17.0 0.089 0.374 M:None:0.326
G:P54921:0.047
3j99 4 P32851 92.42 1e-36 EM
 2015-01-28 GLU L:17 L:206 90.0 0.474 H -48.2 -44.8 15.0 0.079 0.395 M:None:0.342
G:P54921:0.053
5ccg 2 P32851 92.42 1e-36 X-RAY
 2015-08-12 GLU B:17 B:206 83.0 0.437 H -58.6 -45.0 7.0 0.037 0.4 C:P60881:0.4
GLU H:17 H:206 111.0 0.584 H -57.3 -43.7 NA NA NA
5cch 2 P32851 92.42 1e-36 X-RAY
 2015-08-12 GLU B:17 B:206 87.0 0.458 H -61.6 -42.2 15.0 0.079 0.379 C:P60881:0.379
5cci 2 P32851 92.42 1e-36 X-RAY
 2015-08-12 GLU B:17 B:206 98.0 0.516 H -62.9 -38.7 11.0 0.058 0.458 C:P60881:0.458
5w5c 2 P32851 92.42 1e-36 X-RAY
 2017-08-23 GLU B:17 B:206 85.0 0.447 H -64.9 -43.6 4.0 0.021 0.426 C:P60881:0.416
F:P21707:0.016
 GOL
GOL
HOH
 7.678
3.193
2.980
 OE2
OE2
CD
 O1
O3
O
5w5d 2 P32851 92.42 1e-36 X-RAY
 2017-08-23 GLU B:17 B:206 86.0 0.453 H -64.4 -41.2 3.0 0.016 0.437 F:P21707:0.011
C:P60881:0.426
 HOH
 4.895
 OE2
 O
6mti 4 P32851 92.42 1e-36 EM
 2019-04-24 GLU H:17 B:206 97.0 0.511 H -62.9 -38.8 11.0 0.058 0.453 I:P60881:0.453
GLU L:17 F:206 98.0 0.516 H -63.0 -38.6 12.0 0.063 0.453 M:P60881:0.453
GLU P:17 J:206 100.0 0.526 H -62.9 -38.7 12.0 0.063 0.463 Q:P60881:0.463
GLU T:17 N:206 99.0 0.521 H -62.9 -38.6 10.0 0.053 0.468 U:P60881:0.468
GLU X:17 R:206 98.0 0.516 H -62.8 -38.8 11.0 0.058 0.458 Y:P60881:0.458
GLU BA:17 V:206 98.0 0.516 H -62.9 -38.6 12.0 0.063 0.453 CA:P60881:0.453
1n7s 2 P32851 92.42 1e-36 X-RAY
 2002-12-27 GLU B:18 B:206 79.0 0.416 H -61.0 -41.8 7.0 0.037 0.379 C:P60881:0.379
 HOH
 3.300
 OE1
 O
3rk2 2 P32851 92.06 1e-34 X-RAY
 2011-07-27 GLU B:18 B:206 112.0 0.589 H -61.7 -43.2 22.0 0.116 0.473 C:P60880:0.474
 HOH
 6.520
 N
 O
GLU F:18 F:206 114.0 0.6 H -56.6 -46.8 NA NA NA
3rk3 2 P32851 92.06 1e-34 X-RAY
 2011-07-27 GLU B:18 B:206 103.0 0.542 H -64.0 -52.3 27.0 0.142 0.4 C:P60880:0.4
3rl0 2 P32851 92.06 1e-34 X-RAY
 2011-07-27 GLU B:18 B:206 117.0 0.616 H -62.7 -47.3 28.0 0.147 0.469 C:P60880:0.468
GLU F:18 F:206 114.0 0.6 H -62.8 -48.4 NA NA NA
GLU J:18 J:206 117.0 0.616 H -62.7 -48.0 NA NA NA
GLU N:18 N:206 70.0 0.368 H -62.7 -47.9 NA NA NA
GLU R:18 R:206 118.0 0.621 H -62.7 -48.3 NA NA NA
GLU V:18 V:206 97.0 0.511 H -62.4 -47.9 NA NA NA
GLU Z:18 Z:206 95.0 0.5 H -63.2 -48.0 NA NA NA
GLU DA:18 d:206 82.0 0.432 H -63.1 -48.5 NA NA NA
1kil 2 P32851 91.67 3e-32 X-RAY
 2002-03-13 GLU B:18 B:206 76.0 0.4 H -59.2 -49.5 5.0 0.026 0.374 C:P60880:0.374
 HOH
 3.147
 OE2
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p61266-f1 1 P61266 100.0 0.0 GLU A:205 A:205 80.0 0.421 H -59.4 -39.0
af-q16623-f1 1 Q16623 81.6 2e-161 GLU A:206 A:206 46.0 0.242 H -61.6 -37.2