Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 31283197 . C A CCDS45470.1:NM_000632.3:c.588ttC>ttA_NP_000623.2:p.196F>L Homo sapiens integrin subunit alpha M (ITGAM), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rhw 3 P11215 100.0 2e-133 X-RAY
 2019-12-18 PHE C:54 C:180 55.0 0.262 E -108.3 147.0 34.0 0.162 0.1 A:A0A0D6HCK9:0.1
1jlm 1 P11215 100.0 2e-131 X-RAY
 1997-01-11 PHE A:54 A:180 31.0 0.148 E -133.7 126.3 31.0 0.148 0.0 HOH
 3.195
 O
 O
4m76 2 P11215 98.97 2e-131 X-RAY
 2013-10-02 PHE B:57 B:180 55.0 0.262 E -137.4 136.5 55.0 0.262 0.0 HOH
 9.286
 CE2
 O
4xw2 1 P11215 98.97 2e-131 X-RAY
 2016-01-13 PHE A:57 A:180 58.0 0.276 E -132.9 129.3 58.0 0.276 0.0 HOH
 2.838
 N
 O
1m1u 1 P11215 99.48 2e-131 X-RAY
 2002-08-07 PHE A:60 A:180 55.0 0.262 E -125.1 140.5 55.0 0.262 0.0 HOH
 3.277
 CE2
 O
1na5 1 P11215 100.0 6e-131 X-RAY
 2003-05-20 PHE A:53 A:180 57.0 0.271 E -134.9 135.5 57.0 0.271 0.0 HOH
 3.725
 CZ
 O
1mf7 1 P11215 99.48 4e-130 X-RAY
 2003-05-20 PHE A:53 A:180 57.0 0.271 E -133.6 131.1 57.0 0.271 0.0 HOH
 2.804
 N
 O
1ido 1 P11215 100.0 3e-129 X-RAY
 1996-08-01 PHE A:54 A:180 52.0 0.248 E -127.3 132.3 52.0 0.248 0.0 HOH
 3.745
 O
 O
3q3g 3 P11215 100.0 3e-129 X-RAY
 2011-11-30 PHE C:49 G:180 50.0 0.238 E -131.3 125.5 25.0 0.119 0.119 B:None:0.119
 EDO
GOL
HOH
 9.492
3.179
2.682
 CE2
O
N
 C2
C3
O
PHE F:49 E:180 49.0 0.233 E -131.5 126.6 NA NA NA
PHE I:49 I:180 49.0 0.233 E -131.6 126.1 NA NA NA
PHE L:49 L:180 47.0 0.224 E -132.0 126.1 NA NA NA
1bhq 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 PHE A:48 1:180 51.0 0.243 E -157.1 121.3 51.0 0.243 0.0 HOH
 2.867
 N
 O
PHE B:48 2:480 61.0 0.29 E -134.2 115.3 61.0 0.29 0.0 HOH
 4.108
 CE2
 O
1bho 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 PHE A:49 1:180 57.0 0.271 E -142.9 115.7 57.0 0.271 0.0 HOH
 2.572
 N
 O
PHE B:49 2:480 56.0 0.267 E -128.2 120.0 56.0 0.267 0.0 HOH
 4.278
 CE2
 O
1idn 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 PHE A:49 1:180 55.0 0.262 E -146.9 108.2 55.0 0.262 0.0 HOH
 2.317
 N
 O
PHE B:49 2:480 56.0 0.267 E -138.4 136.9 56.0 0.267 0.0 HOH
 3.745
 CE2
 O
3qa3 3 P11215 99.47 6e-128 X-RAY
 2011-11-30 PHE C:49 G:180 47.0 0.224 E -130.5 128.7 22.0 0.105 0.119 B:None:0.119
 GOL
GOL
HOH
 4.497
2.897
8.422
 CE2
O
O
 O3
C1
O
PHE F:49 E:180 48.0 0.229 E -130.8 129.2 NA NA NA
PHE I:49 I:180 49.0 0.233 E -130.7 129.3 NA NA NA
PHE L:49 L:180 48.0 0.229 E -131.3 129.0 NA NA NA
1n9z 1 P11215 98.44 5e-127 X-RAY
 2003-05-20 PHE A:53 A:180 48.0 0.229 E -127.3 143.6 48.0 0.229 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p11215-f1 1 P11215 99.91 0.0 PHE A:196 A:196 43.0 0.205 E -133.0 122.1