Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 31283198 . C A CCDS45470.1:NM_000632.3:c.589Cgg>Agg_NP_000623.2:p.197R>R Homo sapiens integrin subunit alpha M (ITGAM), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rhw 3 P11215 100.0 2e-133 X-RAY
 2019-12-18 ARG C:55 C:181 111.0 0.493 E -145.6 120.2 111.0 0.493 0.0
1jlm 1 P11215 100.0 2e-131 X-RAY
 1997-01-11 ARG A:55 A:181 141.0 0.627 E -129.6 126.9 141.0 0.627 0.0 HOH
 3.585
 NH2
 O
4m76 2 P11215 98.97 2e-131 X-RAY
 2013-10-02 ARG B:58 B:181 119.0 0.529 E -142.9 115.7 119.0 0.529 0.0
4xw2 1 P11215 98.97 2e-131 X-RAY
 2016-01-13 ARG A:58 A:181 108.0 0.48 E -129.8 113.2 108.0 0.48 0.0 HOH
 3.656
 CA
 O
1m1u 1 P11215 99.48 2e-131 X-RAY
 2002-08-07 ARG A:61 A:181 110.0 0.489 E -138.8 117.1 110.0 0.489 0.0 HOH
 2.633
 NH1
 O
1na5 1 P11215 100.0 6e-131 X-RAY
 2003-05-20 ARG A:54 A:181 97.0 0.431 E -136.1 125.3 97.0 0.431 0.0 HOH
 2.779
 NE
 O
1mf7 1 P11215 99.48 4e-130 X-RAY
 2003-05-20 ARG A:54 A:181 127.0 0.564 E -131.4 122.0 127.0 0.564 0.0 HOH
 3.853
 CA
 O
1ido 1 P11215 100.0 3e-129 X-RAY
 1996-08-01 ARG A:55 A:181 104.0 0.462 E -128.9 111.3 104.0 0.462 0.0 HOH
 3.020
 NE
 O
3q3g 3 P11215 100.0 3e-129 X-RAY
 2011-11-30 ARG C:50 G:181 137.0 0.609 E -133.9 123.6 97.0 0.431 0.178 B:None:0.178
 GOL
HOH
 4.425
3.488
 N
NH2
 C3
O
ARG F:50 E:181 139.0 0.618 E -134.3 123.6 NA NA NA
ARG I:50 I:181 140.0 0.622 E -133.8 123.3 NA NA NA
ARG L:50 L:181 139.0 0.618 E -134.4 124.1 NA NA NA
1bhq 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:49 1:181 122.0 0.542 E -111.0 128.7 122.0 0.542 0.0 HOH
 3.831
 C
 O
ARG B:49 2:481 105.0 0.467 E -102.1 104.2 105.0 0.467 0.0 HOH
 2.544
 NH2
 O
1bho 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:50 1:181 128.0 0.569 E -104.0 119.5 128.0 0.569 0.0 HOH
 4.259
 CA
 O
ARG B:50 2:481 104.0 0.462 E -105.1 112.6 104.0 0.462 0.0 HOH
 4.675
 NH2
 O
1idn 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:50 1:181 97.0 0.431 E -97.3 116.3 97.0 0.431 0.0 HOH
 3.483
 CZ
 O
ARG B:50 2:481 118.0 0.524 E -119.9 120.9 118.0 0.524 0.0 HOH
 2.732
 NH1
 O
3qa3 3 P11215 99.47 6e-128 X-RAY
 2011-11-30 ARG C:50 G:181 144.0 0.64 E -135.5 128.8 96.0 0.427 0.213 B:None:0.213
 GOL
HOH
 3.461
3.413
 CA
NH1
 O1
O
ARG F:50 E:181 143.0 0.636 E -136.4 129.1 NA NA NA
ARG I:50 I:181 143.0 0.636 E -135.9 129.1 NA NA NA
ARG L:50 L:181 143.0 0.636 E -136.6 129.0 NA NA NA
1n9z 1 P11215 98.44 5e-127 X-RAY
 2003-05-20 ARG A:54 A:181 127.0 0.564 E -131.0 130.9 127.0 0.564 0.0 MG
 8.477
 O
 MG

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p11215-f1 1 P11215 99.91 0.0 ARG A:197 A:197 125.0 0.556 E -125.5 118.8