Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 31284711 . G A CCDS45470.1:NM_000632.3:c.730Gga>Aga_NP_000623.2:p.244G>R Homo sapiens integrin subunit alpha M (ITGAM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rhw 3 P11215 100.0 2e-133 X-RAY
 2019-12-18 GLY C:102 C:228 23.0 0.307 T 121.4 -8.7 23.0 0.307 0.0
1jlm 1 P11215 100.0 2e-131 X-RAY
 1997-01-11 GLY A:102 A:228 18.0 0.24 T 98.7 2.8 18.0 0.24 0.0 HOH
 3.523
 CA
 O
4m76 2 P11215 98.97 2e-131 X-RAY
 2013-10-02 GLY B:105 B:228 12.0 0.16 T 127.1 -4.4 12.0 0.16 0.0
4xw2 1 P11215 98.97 2e-131 X-RAY
 2016-01-13 GLY A:105 A:228 16.0 0.213 T 98.6 -0.7 16.0 0.213 0.0 HOH
 5.271
 N
 O
1m1u 1 P11215 99.48 2e-131 X-RAY
 2002-08-07 GLY A:108 A:228 12.0 0.16 T 115.0 -18.9 12.0 0.16 0.0 HOH
 2.850
 O
 O
1na5 1 P11215 100.0 6e-131 X-RAY
 2003-05-20 GLY A:101 A:228 17.0 0.227 T 92.4 3.3 17.0 0.227 0.0 HOH
 2.731
 O
 O
1mf7 1 P11215 99.48 4e-130 X-RAY
 2003-05-20 GLY A:101 A:228 16.0 0.213 T 93.6 4.4 16.0 0.213 0.0 HOH
 2.617
 O
 O
1ido 1 P11215 100.0 3e-129 X-RAY
 1996-08-01 GLY A:102 A:228 14.0 0.187 T 103.3 -5.6 14.0 0.187 0.0 HOH
 3.866
 O
 O
3q3g 3 P11215 100.0 3e-129 X-RAY
 2011-11-30 GLY C:97 G:228 13.0 0.173 T 86.3 13.9 13.0 0.173 0.0
GLY F:97 E:228 14.0 0.187 T 88.3 14.3 NA NA NA
GLY I:97 I:228 15.0 0.2 T 81.9 13.5 NA NA NA
GLY L:97 L:228 13.0 0.173 T 95.3 13.3 NA NA NA
1bhq 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 GLY A:96 1:228 17.0 0.227 T 70.4 6.5 17.0 0.227 0.0 ACE
HOH
 9.970
2.680
 O
O
 CH3
O
GLY B:96 2:528 15.0 0.2 T 91.5 -32.9 15.0 0.2 0.0 ACE
HOH
 9.845
7.404
 O
C
 CH3
O
1bho 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 GLY A:97 1:228 16.0 0.213 T 78.7 1.2 16.0 0.213 0.0 HOH
 2.525
 O
 O
GLY B:97 2:528 15.0 0.2 T 102.9 -40.5 15.0 0.2 0.0 HOH
 8.064
 C
 O
1idn 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 GLY A:97 1:228 16.0 0.213 T 75.5 8.0 16.0 0.213 0.0 HOH
 2.986
 O
 O
GLY B:97 2:528 14.0 0.187 T 94.1 -41.8 14.0 0.187 0.0 HOH
 7.340
 O
 O
3qa3 3 P11215 99.47 6e-128 X-RAY
 2011-11-30 GLY C:97 G:228 16.0 0.213 T 87.1 4.9 16.0 0.213 0.0
GLY F:97 E:228 17.0 0.227 T 83.0 8.5 NA NA NA
GLY I:97 I:228 19.0 0.253 T 83.3 7.6 NA NA NA
GLY L:97 L:228 17.0 0.227 T 83.2 8.6 NA NA NA
1n9z 1 P11215 98.44 5e-127 X-RAY
 2003-05-20 GLY A:101 A:228 10.0 0.133 T 137.0 -28.8 10.0 0.133 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p11215-f1 1 P11215 99.91 0.0 GLY A:244 A:244 18.0 0.24 T 88.1 6.3