Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 31284718 . G A CCDS45470.1:NM_000632.3:c.737cGa>cAa_NP_000623.2:p.246R>Q Homo sapiens integrin subunit alpha M (ITGAM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rhw 3 P11215 100.0 2e-133 X-RAY
 2019-12-18 ARG C:104 C:230 86.0 0.382 -53.0 142.1 86.0 0.382 0.0
1jlm 1 P11215 100.0 2e-131 X-RAY
 1997-01-11 ARG A:104 A:230 56.0 0.249 -98.6 119.2 56.0 0.249 0.0 HOH
 2.997
 NH1
 O
4m76 2 P11215 98.97 2e-131 X-RAY
 2013-10-02 ARG B:107 B:230 69.0 0.307 -89.5 144.8 69.0 0.307 0.0
4xw2 1 P11215 98.97 2e-131 X-RAY
 2016-01-13 ARG A:107 A:230 83.0 0.369 -106.7 142.7 83.0 0.369 0.0 HOH
 2.965
 O
 O
1m1u 1 P11215 99.48 2e-131 X-RAY
 2002-08-07 ARG A:110 A:230 61.0 0.271 -105.2 128.2 61.0 0.271 0.0 HOH
 3.288
 CA
 O
1na5 1 P11215 100.0 6e-131 X-RAY
 2003-05-20 ARG A:103 A:230 52.0 0.231 -95.0 132.2 52.0 0.231 0.0 HOH
 2.695
 NH1
 O
1mf7 1 P11215 99.48 4e-130 X-RAY
 2003-05-20 ARG A:103 A:230 53.0 0.236 -99.7 132.6 53.0 0.236 0.0 HOH
 3.002
 NH1
 O
1ido 1 P11215 100.0 3e-129 X-RAY
 1996-08-01 ARG A:104 A:230 66.0 0.293 -102.4 139.4 66.0 0.293 0.0 HOH
 4.071
 NH1
 O
3q3g 3 P11215 100.0 3e-129 X-RAY
 2011-11-30 ARG C:99 G:230 63.0 0.28 -97.5 135.4 63.0 0.28 0.0
ARG F:99 E:230 59.0 0.262 -97.9 136.8 NA NA NA
ARG I:99 I:230 60.0 0.267 -97.2 135.8 NA NA NA
ARG L:99 L:230 64.0 0.284 -96.7 136.7 NA NA NA
1bhq 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:98 1:230 63.0 0.28 -84.4 130.7 63.0 0.28 0.0 ACE
HOH
 3.696
3.939
 NH1
CD
 CH3
O
ARG B:98 2:530 72.0 0.32 -101.7 131.9 72.0 0.32 0.0 ACE
HOH
 4.329
3.996
 NH1
O
 CH3
O
1bho 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:99 1:230 64.0 0.284 -96.4 128.5 64.0 0.284 0.0 HOH
 3.349
 NH1
 O
ARG B:99 2:530 70.0 0.311 -102.2 132.5 70.0 0.311 0.0 HOH
 4.067
 NH1
 O
1idn 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:99 1:230 70.0 0.311 -99.6 130.0 70.0 0.311 0.0 HOH
 3.238
 NH1
 O
ARG B:99 2:530 66.0 0.293 -96.4 132.9 66.0 0.293 0.0 HOH
 3.515
 C
 O
3qa3 3 P11215 99.47 6e-128 X-RAY
 2011-11-30 ARG C:99 G:230 48.0 0.213 -83.9 125.6 48.0 0.213 0.0
ARG F:99 E:230 52.0 0.231 -83.6 126.9 NA NA NA
ARG I:99 I:230 67.0 0.298 -83.9 127.1 NA NA NA
ARG L:99 L:230 75.0 0.333 -82.9 127.4 NA NA NA
1n9z 1 P11215 98.44 5e-127 X-RAY
 2003-05-20 ARG A:103 A:230 76.0 0.338 -109.0 176.5 76.0 0.338 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p11215-f1 1 P11215 99.91 0.0 ARG A:246 A:246 52.0 0.231 -84.5 128.8