Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 31284720 . A C CCDS45470.1:NM_000632.3:c.739Aag>Cag_NP_000623.2:p.247K>Q Homo sapiens integrin subunit alpha M (ITGAM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rhw 3 P11215 100.0 2e-133 X-RAY
 2019-12-18 LYS C:105 C:231 171.0 0.855 S -63.4 -48.5 171.0 0.855 0.0
1jlm 1 P11215 100.0 2e-131 X-RAY
 1997-01-11 LYS A:105 A:231 180.0 0.9 T -59.4 135.5 180.0 0.9 0.0 HOH
 2.984
 CA
 O
4m76 2 P11215 98.97 2e-131 X-RAY
 2013-10-02 LYS B:108 B:231 167.0 0.835 T -68.5 140.6 167.0 0.835 0.0
4xw2 1 P11215 98.97 2e-131 X-RAY
 2016-01-13 LYS A:108 A:231 201.0 1.0 T -52.4 -56.4 201.0 1.0 0.0 HOH
 5.079
 N
 O
1m1u 1 P11215 99.48 2e-131 X-RAY
 2002-08-07 LYS A:111 A:231 169.0 0.845 T -64.8 146.6 169.0 0.845 0.0 HOH
 2.687
 N
 O
1na5 1 P11215 100.0 6e-131 X-RAY
 2003-05-20 LYS A:104 A:231 187.0 0.935 T -69.5 135.0 187.0 0.935 0.0 HOH
 3.045
 N
 O
1mf7 1 P11215 99.48 4e-130 X-RAY
 2003-05-20 LYS A:104 A:231 184.0 0.92 T -56.3 127.9 184.0 0.92 0.0 HOH
 3.062
 O
 O
1ido 1 P11215 100.0 3e-129 X-RAY
 1996-08-01 LYS A:105 A:231 175.0 0.875 S -74.1 145.5 175.0 0.875 0.0 HOH
 4.781
 CA
 O
3q3g 3 P11215 100.0 3e-129 X-RAY
 2011-11-30 LYS C:100 G:231 170.0 0.85 T -58.8 -53.3 170.0 0.85 0.0
LYS F:100 E:231 168.0 0.84 T -58.1 -54.6 NA NA NA
LYS I:100 I:231 169.0 0.845 T -59.3 -53.2 NA NA NA
LYS L:100 L:231 167.0 0.835 T -58.2 -54.7 NA NA NA
1bhq 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 LYS A:99 1:231 179.0 0.895 T -56.9 -62.2 179.0 0.895 0.0 ACE
HOH
 8.522
2.888
 C
O
 O
O
LYS B:99 2:531 166.0 0.83 T -62.3 -37.3 166.0 0.83 0.0 ACE
HOH
 7.951
3.106
 C
O
 O
O
1bho 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 LYS A:100 1:231 182.0 0.91 T -49.9 -52.7 182.0 0.91 0.0 HOH
 3.109
 O
 O
LYS B:100 2:531 179.0 0.895 T -65.3 -37.6 179.0 0.895 0.0 HOH
 3.170
 O
 O
1idn 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 LYS A:100 1:231 181.0 0.905 T -51.9 -57.8 181.0 0.905 0.0 HOH
 2.876
 O
 O
LYS B:100 2:531 191.0 0.955 T -64.8 -40.1 191.0 0.955 0.0 HOH
 2.933
 CA
 O
3qa3 3 P11215 99.47 6e-128 X-RAY
 2011-11-30 LYS C:100 G:231 162.0 0.81 T -75.4 145.9 162.0 0.81 0.0
LYS F:100 E:231 163.0 0.815 T -74.2 144.9 NA NA NA
LYS I:100 I:231 166.0 0.83 T -74.5 144.6 NA NA NA
LYS L:100 L:231 165.0 0.825 T -74.7 144.6 NA NA NA
1n9z 1 P11215 98.44 5e-127 X-RAY
 2003-05-20 LYS A:104 A:231 177.0 0.885 S -102.2 157.9 177.0 0.885 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p11215-f1 1 P11215 99.91 0.0 LYS A:247 A:247 173.0 0.865 T -58.4 -35.9