Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 31286885 . C A CCDS45470.1:NM_000632.3:c.874Cgc>Agc_NP_000623.2:p.292R>S Homo sapiens integrin subunit alpha M (ITGAM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rhw 3 P11215 100.0 2e-133 X-RAY
 2019-12-18 ARG C:150 C:276 197.0 0.876 S -74.2 52.7 184.0 0.818 0.058 B:A0A0D6HC73:0.058
1jlm 1 P11215 100.0 2e-131 X-RAY
 1997-01-11 ARG A:150 A:276 171.0 0.76 S -97.0 24.2 171.0 0.76 0.0 HOH
 3.082
 NH2
 O
4m76 2 P11215 98.97 2e-131 X-RAY
 2013-10-02 ARG B:153 B:276 179.0 0.796 T -69.8 -55.1 132.0 0.587 0.209 A:P01024:0.209
 NI
HOH
 6.581
5.156
 NH1
NH1
 NI
O
4xw2 1 P11215 98.97 2e-131 X-RAY
 2016-01-13 ARG A:153 A:276 194.0 0.862 T -93.1 -10.5 194.0 0.862 0.0 HOH
 3.661
 CG
 O
1m1u 1 P11215 99.48 2e-131 X-RAY
 2002-08-07 ARG A:156 A:276 195.0 0.867 S -91.6 6.6 195.0 0.867 0.0 HOH
 4.292
 NH2
 O
1na5 1 P11215 100.0 6e-131 X-RAY
 2003-05-20 ARG A:149 A:276 128.0 0.569 S -66.2 -38.8 128.0 0.569 0.0 HOH
 2.571
 NE
 O
1mf7 1 P11215 99.48 4e-130 X-RAY
 2003-05-20 ARG A:149 A:276 125.0 0.556 -86.3 -25.8 125.0 0.556 0.0 HOH
 2.517
 NH1
 O
1ido 1 P11215 100.0 3e-129 X-RAY
 1996-08-01 ARG A:150 A:276 172.0 0.764 S -110.8 10.6 172.0 0.764 0.0 HOH
 3.801
 NE
 O
3q3g 3 P11215 100.0 3e-129 X-RAY
 2011-11-30 ARG C:145 G:276 97.0 0.431 -94.3 12.1 97.0 0.431 0.0 EDO
HOH
 9.688
2.939
 N
NH2
 O1
O
ARG F:145 E:276 173.0 0.769 S -91.9 -5.1 NA NA NA
ARG I:145 I:276 149.0 0.662 -89.0 6.2 NA NA NA
ARG L:145 L:276 97.0 0.431 -67.9 -8.4 NA NA NA
1bhq 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:144 1:276 134.0 0.596 -98.4 0.9 134.0 0.596 0.0 HOH
 5.974
 CA
 O
ARG B:144 2:576 214.0 0.951 G -101.3 -7.7 214.0 0.951 0.0 HOH
 9.747
 N
 O
1bho 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:145 1:276 126.0 0.56 -96.1 -2.1 126.0 0.56 0.0 HOH
 5.734
 N
 O
ARG B:145 2:576 214.0 0.951 -93.9 0.5 214.0 0.951 0.0
1idn 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ARG A:145 1:276 186.0 0.827 -84.3 -1.5 186.0 0.827 0.0 HOH
 5.358
 CA
 O
ARG B:145 2:576 202.0 0.898 -100.3 20.8 202.0 0.898 0.0 HOH
 9.301
 N
 O
3qa3 3 P11215 99.47 6e-128 X-RAY
 2011-11-30 ARG C:145 G:276 134.0 0.596 -86.1 -35.4 134.0 0.596 0.0 HOH
 7.642
 N
 O
ARG F:145 E:276 132.0 0.587 S -80.6 39.3 NA NA NA
ARG I:145 I:276 178.0 0.791 -71.2 -29.0 NA NA NA
ARG L:145 L:276 158.0 0.702 S -65.1 12.0 NA NA NA
1n9z 1 P11215 98.44 5e-127 X-RAY
 2003-05-20 ARG A:149 A:276 174.0 0.773 S -91.8 55.4 174.0 0.773 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p11215-f1 1 P11215 99.91 0.0 ARG A:292 A:292 178.0 0.791 G -72.3 -25.8