Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 31286989 . C A CCDS45470.1:NM_000632.3:c.978aaC>aaA_NP_000623.2:p.326N>K Homo sapiens integrin subunit alpha M (ITGAM), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6rhw 3 P11215 100.0 2e-133 X-RAY
 2019-12-18 ASN C:184 NA:NA DO NA DO DO DO NA NA NA
1jlm 1 P11215 100.0 2e-131 X-RAY
 1997-01-11 ASN A:184 A:310 97.0 0.606 H -63.4 -42.5 97.0 0.606 0.0 HOH
 2.874
 OD1
 O
4m76 2 P11215 98.97 2e-131 X-RAY
 2013-10-02 ASN B:187 B:310 159.0 0.994 -80.0 360.0 159.0 0.994 0.0
4xw2 1 P11215 98.97 2e-131 X-RAY
 2016-01-13 ASN A:187 A:310 68.0 0.425 H -63.4 -43.8 68.0 0.425 0.0 HOH
 9.670
 C
 O
1m1u 1 P11215 99.48 2e-131 X-RAY
 2002-08-07 ASN A:190 A:310 85.0 0.531 H -64.0 -46.0 85.0 0.531 0.0 HOH
 6.770
 CB
 O
1na5 1 P11215 100.0 6e-131 X-RAY
 2003-05-20 ASN A:183 A:310 86.0 0.537 H -66.3 -43.1 86.0 0.537 0.0 HOH
 3.022
 N
 O
1mf7 1 P11215 99.48 4e-130 X-RAY
 2003-05-20 ASN A:183 A:310 82.0 0.512 H -71.9 -38.9 82.0 0.512 0.0 HOH
 2.591
 ND2
 O
1ido 1 P11215 100.0 3e-129 X-RAY
 1996-08-01 ASN A:184 A:310 87.0 0.544 H -62.5 -45.4 87.0 0.544 0.0 HOH
 5.530
 N
 O
3q3g 3 P11215 100.0 3e-129 X-RAY
 2011-11-30 ASN C:179 G:310 84.0 0.525 H -69.3 -46.4 84.0 0.525 0.0 HOH
 4.636
 N
 O
ASN F:179 E:310 85.0 0.531 H -68.9 -46.5 NA NA NA
ASN I:179 I:310 85.0 0.531 H -73.0 -46.7 NA NA NA
ASN L:179 L:310 85.0 0.531 H -75.7 -46.9 NA NA NA
1bhq 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ASN A:178 1:310 83.0 0.519 H -75.0 -32.9 83.0 0.519 0.0 HOH
 3.366
 OD1
 O
ASN B:178 2:610 87.0 0.544 H -62.3 -50.6 87.0 0.544 0.0 HOH
 2.041
 OD1
 O
1bho 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ASN A:179 1:310 82.0 0.512 H -70.7 -30.0 82.0 0.512 0.0 HOH
 3.341
 ND2
 O
ASN B:179 2:610 87.0 0.544 H -71.7 -41.1 87.0 0.544 0.0 HOH
 2.932
 OD1
 O
1idn 1 P11215 100.0 2e-128 X-RAY
 1998-11-04 ASN A:179 1:310 84.0 0.525 H -57.1 -44.5 84.0 0.525 0.0 HOH
 3.417
 ND2
 O
ASN B:179 2:610 89.0 0.556 H -54.7 -55.6 89.0 0.556 0.0 HOH
 4.203
 N
 O
3qa3 3 P11215 99.47 6e-128 X-RAY
 2011-11-30 ASN C:179 G:310 76.0 0.475 T -97.4 -69.1 76.0 0.475 0.0
ASN F:179 E:310 118.0 0.738 H -72.7 -43.4 NA NA NA
ASN I:179 I:310 116.0 0.725 T -94.8 -24.7 NA NA NA
ASN L:179 L:310 108.0 0.675 T -61.4 -40.5 NA NA NA
1n9z 1 P11215 98.44 5e-127 X-RAY
 2003-05-20 ASN A:183 A:310 79.0 0.494 H -67.0 -54.6 79.0 0.494 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p11215-f1 1 P11215 99.91 0.0 ASN A:326 A:326 78.0 0.487 H -66.0 -38.2