Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 72093015 . G A CCDS45524.1:NM_005143.3:c.370Gtg>Atg_NP_005134.1:p.124V>M Homo sapiens haptoglobin (HP), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4wjg 3 P00738 100.0 0.0 X-RAY
2014-11-26 VAL C:33 C:124 28.0 0.181 E -83.7 146.9 28.0 0.181 0.0
VAL H:33 H:124 28.0 0.181 E -82.6 147.2 28.0 0.181 0.0
VAL M:33 M:124 28.0 0.181 E -84.5 147.3 NA NA NA
VAL R:33 R:124 29.0 0.187 E -82.2 147.6 NA NA NA
VAL W:33 W:124 28.0 0.181 E -82.4 146.8 NA NA NA
VAL BA:33 2:124 29.0 0.187 E -83.8 146.9 NA NA NA
4f4o 3 Q8SPS7 81.13 0.0 X-RAY
2012-08-29 VAL C:65 C:65 17.0 0.11 E -97.1 126.5 13.0 0.084 0.026 F:Q8SPS7:0.026
VAL F:65 F:65 18.0 0.116 E -113.1 123.5 15.0 0.097 0.019 C:Q8SPS7:0.019
VAL I:65 I:65 17.0 0.11 E -97.7 125.6 NA NA NA
VAL L:65 L:65 19.0 0.123 E -109.3 120.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00738-f1 1 P00738 100.0 0.0 VAL A:124 A:124 29.0 0.187 B -88.6 122.2
af-p00739-f1 1 P00739 91.85 0.0 VAL A:66 A:66 20.0 0.129 E -97.6 129.8