Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 72094379 . G A CCDS45524.1:NM_005143.3:c.811Gat>Aat_NP_005134.1:p.271D>N Homo sapiens haptoglobin (HP), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4wjg 3 P00738 100.0 0.0 X-RAY
2014-11-26 ASP C:180 C:267 45.0 0.3 -114.4 108.3 45.0 0.3 0.0
ASP H:180 H:267 45.0 0.3 -115.3 107.3 45.0 0.3 0.0
ASP M:180 M:267 45.0 0.3 -114.7 108.3 NA NA NA
ASP R:180 R:267 42.0 0.28 -121.4 107.6 NA NA NA
ASP W:180 W:267 45.0 0.3 -115.1 107.7 NA NA NA
ASP BA:180 2:267 44.0 0.293 -115.5 107.6 NA NA NA
4f4o 3 Q8SPS7 81.13 0.0 X-RAY
2012-08-29 ASP C:212 C:212 81.0 0.54 -93.8 108.4 81.0 0.54 0.0
ASP F:212 F:212 78.0 0.52 -94.4 108.6 78.0 0.52 0.0
ASP I:212 I:212 77.0 0.513 -95.2 108.4 NA NA NA
ASP L:212 L:212 77.0 0.513 -94.3 107.3 NA NA NA
4x0l 3 P00738 100.0 0.0 X-RAY
2014-12-24 ASP C:124 C:271 82.0 0.547 -94.9 100.6 82.0 0.547 0.0 HOH
2.718
OD1
O
5hu6 3 P00738 100.0 0.0 X-RAY
2016-03-02 ASP C:124 C:271 66.0 0.44 -96.8 100.8 66.0 0.44 0.0
6tb2 3 P00738 98.46 0.0 X-RAY
2019-12-18 ASP C:132 C:271 94.0 0.627 -93.6 106.2 94.0 0.627 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00738-f1 1 P00738 100.0 0.0 ASP A:271 A:271 63.0 0.42 -76.5 119.7
af-p00739-f1 1 P00739 91.85 0.0 ASN A:213 A:213 72.0 0.45 -77.4 118.8