Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 72094397 . C A CCDS45524.1:NM_005143.3:c.829Cgt>Agt_NP_005134.1:p.277R>S Homo sapiens haptoglobin (HP), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4wjg 3 P00738 100.0 0.0 X-RAY
2014-11-26 ARG C:186 C:273 86.0 0.382 -78.0 158.7 45.0 0.2 0.182 E:I7BA80:0.182
ARG H:186 H:273 87.0 0.387 -78.7 156.4 45.0 0.2 0.187 J:I7BA80:0.187
ARG M:186 M:273 87.0 0.387 -78.2 158.0 NA NA NA
ARG R:186 R:273 86.0 0.382 -78.8 158.1 NA NA NA
ARG W:186 W:273 88.0 0.391 -77.9 158.6 NA NA NA
ARG BA:186 2:273 85.0 0.378 -77.7 158.7 NA NA NA
4f4o 3 Q8SPS7 81.13 0.0 X-RAY
2012-08-29 LEU C:218 C:218 60.0 0.353 -59.5 130.2 60.0 0.353 0.0
LEU F:218 F:218 63.0 0.371 -62.8 132.4 63.0 0.371 0.0
LEU I:218 I:218 62.0 0.365 -60.3 131.7 NA NA NA
LEU L:218 L:218 63.0 0.371 -62.9 133.8 NA NA NA
4x0l 3 P00738 100.0 0.0 X-RAY
2014-12-24 ARG C:130 C:277 72.0 0.32 -60.0 125.0 72.0 0.32 0.0 HOH
3.254
CD
O
5hu6 3 P00738 100.0 0.0 X-RAY
2016-03-02 ARG C:130 C:277 80.0 0.356 -98.1 138.4 60.0 0.267 0.089 D:I7B1A7:0.089
6tb2 3 P00738 98.46 0.0 X-RAY
2019-12-18 ARG C:138 C:277 67.0 0.298 -60.3 128.3 67.0 0.298 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00738-f1 1 P00738 100.0 0.0 ARG A:277 A:277 91.0 0.404 -60.9 126.6
af-p00739-f1 1 P00739 91.85 0.0 ARG A:219 A:219 91.0 0.404 -61.6 127.3