Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 72094526 . G A CCDS45524.1:NM_005143.3:c.958Gaa>Aaa_NP_005134.1:p.320E>K Homo sapiens haptoglobin (HP), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4wjg 3 P00738 100.0 0.0 X-RAY
2014-11-26 GLU C:229 C:316 160.0 0.842 T -84.0 -19.7 160.0 0.842 0.0 NAG
9.425
OE2
O6
GLU H:229 H:316 163.0 0.858 T -83.9 -19.7 163.0 0.858 0.0 NAG
9.722
OE2
O4
GLU M:229 M:316 163.0 0.858 T -84.5 -19.4 NA NA NA
GLU R:229 R:316 161.0 0.847 T -83.0 -20.1 NA NA NA
GLU W:229 W:316 163.0 0.858 T -83.7 -19.8 NA NA NA
GLU BA:229 2:316 160.0 0.842 T -83.2 -19.9 NA NA NA
4f4o 3 Q8SPS7 81.13 0.0 X-RAY
2012-08-29 GLU C:261 C:261 166.0 0.874 G -69.3 -13.3 166.0 0.874 0.0
GLU F:261 F:261 161.0 0.847 G -69.4 -12.6 161.0 0.847 0.0
GLU I:261 I:261 164.0 0.863 G -70.6 -13.2 NA NA NA
GLU L:261 L:261 164.0 0.863 G -68.6 -13.5 NA NA NA
4x0l 3 P00738 100.0 0.0 X-RAY
2014-12-24 GLU C:173 C:320 159.0 0.837 G -71.4 -13.2 159.0 0.837 0.0 HOH
3.809
O
O
5hu6 3 P00738 100.0 0.0 X-RAY
2016-03-02 GLU C:173 C:320 159.0 0.837 G -70.3 -13.4 159.0 0.837 0.0
6tb2 3 P00738 98.46 0.0 X-RAY
2019-12-18 GLU C:181 C:320 177.0 0.932 G -74.9 2.7 177.0 0.932 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00738-f1 1 P00738 100.0 0.0 GLU A:320 A:320 163.0 0.858 G -71.5 -13.3
af-p00739-f1 1 P00739 91.85 0.0 LYS A:262 A:262 188.0 0.94 G -69.7 -22.7