Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 72110790 | . | C | A | CCDS42193.1:NM_020995.3:c.857tCt>tAt_NP_066275.3:p.286S>Y | Homo sapiens haptoglobin-related protein (HPR), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
4wjg | 3 | P00738 | 92.68 | 0.0 |
X-RAY |
2014-11-26 | SER | C:253 | C:340 | 12.0 | 0.104 | -70.8 | 179.9 | 11.0 | 0.096 | 0.008 |
E:I7BA80:0.009 |
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SER | H:253 | H:340 | 11.0 | 0.096 | -71.1 | 177.9 | 10.0 | 0.087 | 0.009 |
J:I7BA80:0.009 |
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SER | M:253 | M:340 | 11.0 | 0.096 | -71.1 | 178.6 | NA | NA | NA | ||||||||||||||
SER | R:253 | R:340 | 11.0 | 0.096 | -71.1 | -179.7 | NA | NA | NA | ||||||||||||||
SER | W:253 | W:340 | 11.0 | 0.096 | -72.3 | 179.0 | NA | NA | NA | ||||||||||||||
SER | BA:253 | 2:340 | 10.0 | 0.087 | -73.4 | 177.6 | NA | NA | NA | ||||||||||||||
4x0l | 3 | P00738 | 93.44 | 0.0 |
X-RAY |
2014-12-24 | SER | C:197 | C:344 | 95.0 | 0.826 | S | -72.5 | 104.9 | 95.0 | 0.826 | 0.0 |
CAC HOH |
2.972 2.749 |
N O |
O2 O |
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5hu6 | 3 | P00738 | 93.44 | 0.0 |
X-RAY |
2016-03-02 | SER | C:197 | C:344 | 10.0 | 0.087 | -64.8 | 161.8 | 8.0 | 0.07 | 0.017 |
D:I7B1A7:0.017 |
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6tb2 | 3 | P00738 | 91.89 | 4e-178 |
X-RAY |
2019-12-18 | SER | C:205 | C:344 | 31.0 | 0.27 | -174.2 | 122.2 | 31.0 | 0.27 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p00739-f1 | 1 | P00739 | 100.0 | 0.0 | SER | A:286 | A:286 | 10.0 | 0.087 | -64.3 | 165.0 | ||
af-p00738-f1 | 1 | P00738 | 91.85 | 0.0 | SER | A:344 | A:344 | 9.0 | 0.078 | -61.7 | 164.6 |