Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 21968816 | . | A | C | CCDS10601.1:NM_003366.2:c.196Aaa>Caa_NP_003357.2:p.66K>Q | Homo sapiens ubiquinol-cytochrome c reductase core protein II (UQCRC2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 10 | P22695 | 100.0 | 0.0 |
EM |
2017-08-30 | LYS | J:32 | K:66 | 55.0 | 0.275 | S | -73.9 | -14.2 | 55.0 | 0.275 | 0.0 | ||||||
LYS | U:32 | W:66 | 58.0 | 0.29 | S | -69.6 | -17.0 | 58.0 | 0.29 | 0.0 | |||||||||||||
5xth | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | LYS | PB:32 | AK:66 | 55.0 | 0.275 | S | -73.9 | -14.2 | 55.0 | 0.275 | 0.0 | ||||||
LYS | AC:32 | AW:66 | 58.0 | 0.29 | S | -69.6 | -17.0 | 58.0 | 0.29 | 0.0 | |||||||||||||
5xti | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | LYS | PB:32 | AK:66 | 55.0 | 0.275 | S | -73.9 | -14.2 | 55.0 | 0.275 | 0.0 | ||||||
LYS | AC:32 | AW:66 | 58.0 | 0.29 | S | -69.6 | -17.0 | 58.0 | 0.29 | 0.0 | |||||||||||||
1sqb | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2004-09-07 | LYS | B:66 | B:52 | 43.0 | 0.215 | S | -72.8 | 69.1 | 43.0 | 0.215 | 0.0 |
HOH |
3.346 |
CD |
O |
||
1sqp | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2005-11-01 | LYS | B:66 | B:52 | 37.0 | 0.185 | S | -70.4 | 83.0 | 37.0 | 0.185 | 0.0 |
HOH |
3.613 |
CD |
O |
||
4d6t | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | LYS | B:66 | B:52 | 55.0 | 0.275 | S | -85.7 | 82.6 | 55.0 | 0.275 | 0.0 | ||||||
4d6u | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | LYS | B:66 | B:52 | 53.0 | 0.265 | S | -77.2 | 81.5 | 53.0 | 0.265 | 0.0 | ||||||
5okd | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2018-02-28 | LYS | B:66 | B:52 | 66.0 | 0.33 | S | -71.9 | 83.6 | 66.0 | 0.33 | 0.0 | ||||||
6fo6 | 3 | P23004 | 89.4 | 0.0 |
EM |
2018-02-28 | LYS | C:66 | B:52 | 72.0 | 0.36 | S | -100.8 | 73.1 | 72.0 | 0.36 | 0.0 | ||||||
LYS | L:66 | O:52 | 73.0 | 0.365 | S | -100.8 | 73.1 | 73.0 | 0.365 | 0.0 | |||||||||||||
4d6t | 10 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | LYS | L:66 | O:52 | 53.0 | 0.265 | S | -84.8 | 85.1 | NA | NA | NA | ||||||
4d6u | 11 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | LYS | L:66 | O:52 | 51.0 | 0.255 | S | -76.4 | 81.8 | NA | NA | NA | ||||||
6fo0 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | LYS | B:66 | O:52 | 31.0 | 0.155 | B | -88.3 | 90.8 | 31.0 | 0.155 | 0.0 | ||||||
LYS | L:66 | B:52 | 30.0 | 0.15 | B | -88.3 | 90.8 | 30.0 | 0.15 | 0.0 | |||||||||||||
6fo2 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | LYS | B:66 | O:52 | 30.0 | 0.15 | S | -90.1 | 88.7 | 30.0 | 0.15 | 0.0 | ||||||
LYS | L:66 | B:52 | 30.0 | 0.15 | S | -90.2 | 88.8 | 30.0 | 0.15 | 0.0 | |||||||||||||
5gup | 46 | ? | 88.3 | 0.0 |
EM |
2017-03-29 | LYS | VA:66 | v:66 | 42.0 | 0.21 | S | -81.1 | -6.8 | 42.0 | 0.21 | 0.0 | ||||||
LYS | GB:66 | 6:66 | 37.0 | 0.185 | -80.0 | 1.5 | 37.0 | 0.185 | 0.0 | ||||||||||||||
1be3 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-13 | LYS | B:52 | B:52 | 56.0 | 0.28 | S | -67.4 | 18.8 | 56.0 | 0.28 | 0.0 | ||||||
1bgy | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-06 | LYS | B:52 | B:52 | 38.0 | 0.19 | S | -65.7 | 12.8 | 38.0 | 0.19 | 0.0 | ||||||
LYS | M:52 | N:52 | 42.0 | 0.21 | S | -71.9 | 22.9 | 42.0 | 0.21 | 0.0 | |||||||||||||
1l0l | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | LYS | B:52 | B:52 | 56.0 | 0.28 | S | -78.1 | 82.0 | 56.0 | 0.28 | 0.0 | ||||||
1l0n | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | LYS | B:52 | B:52 | 33.0 | 0.165 | S | -75.0 | 90.8 | 33.0 | 0.165 | 0.0 | ||||||
1ntk | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | LYS | B:52 | B:52 | 55.0 | 0.275 | S | -68.6 | 70.6 | 55.0 | 0.275 | 0.0 |
HOH |
3.247 |
CG |
O |
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1ntm | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | LYS | B:52 | B:52 | 36.0 | 0.18 | S | -79.3 | 76.2 | 36.0 | 0.18 | 0.0 |
HOH |
3.415 |
CD |
O |
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1ntz | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | LYS | B:52 | B:52 | 32.0 | 0.16 | S | -79.1 | 82.2 | 32.0 | 0.16 | 0.0 |
HOH |
6.073 |
NZ |
O |
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1nu1 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | LYS | B:52 | B:52 | 32.0 | 0.16 | S | -78.9 | 72.0 | 32.0 | 0.16 | 0.0 | ||||||
1pp9 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | LYS | B:52 | B:52 | 48.0 | 0.24 | S | -82.9 | 75.9 | 48.0 | 0.24 | 0.0 |
GOL HOH |
7.877 2.863 |
CE NZ |
O1 O |
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LYS | L:52 | O:52 | 69.0 | 0.345 | S | -82.6 | 81.1 | 69.0 | 0.345 | 0.0 |
GOL HOH |
8.275 3.454 |
CE CE |
O1 O |
|||||||||
1ppj | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | LYS | B:52 | B:52 | 66.0 | 0.33 | S | -80.3 | 82.8 | 66.0 | 0.33 | 0.0 |
GOL HOH |
8.197 3.895 |
CA CB |
O1 O |
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LYS | L:52 | O:52 | 64.0 | 0.32 | S | -83.0 | 82.2 | 64.0 | 0.32 | 0.0 |
GOL HOH |
8.493 3.608 |
CA CE |
O1 O |
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1sqq | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-10-25 | LYS | B:52 | B:52 | 37.0 | 0.185 | E | -60.9 | 91.7 | 37.0 | 0.185 | 0.0 |
HOH |
4.107 |
CG |
O |
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1sqv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | LYS | B:52 | B:52 | 36.0 | 0.18 | S | -56.7 | 71.5 | 36.0 | 0.18 | 0.0 |
HOH |
3.120 |
CG |
O |
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1sqx | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | LYS | B:52 | B:52 | 38.0 | 0.19 | S | -68.7 | 75.7 | 38.0 | 0.19 | 0.0 |
HOH |
3.253 |
CE |
O |
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2a06 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-06-21 | LYS | B:52 | B:52 | 39.0 | 0.195 | S | -79.4 | 79.6 | 39.0 | 0.195 | 0.0 |
HOH |
2.713 |
NZ |
O |
||
LYS | L:52 | O:52 | 63.0 | 0.315 | S | -81.5 | 78.0 | 63.0 | 0.315 | 0.0 |
GOL HOH |
9.269 3.203 |
CE CE |
O1 O |
|||||||||
2fyu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2006-08-29 | LYS | B:52 | B:52 | 29.0 | 0.145 | S | -81.3 | 73.8 | 29.0 | 0.145 | 0.0 |
HOH |
6.232 |
NZ |
O |
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2ybb | 10 | P23004 | 89.29 | 0.0 |
EM |
2011-10-19 | LYS | J:52 | B:52 | 47.0 | 0.235 | S | -82.9 | 75.8 | 47.0 | 0.235 | 0.0 |
HOH |
2.863 |
NZ |
O |
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LYS | IA:52 | b:52 | 69.0 | 0.345 | S | -82.5 | 81.1 | 69.0 | 0.345 | 0.0 |
HOH |
3.454 |
CE |
O |
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5gpn | 2 | P23004 | 89.29 | 0.0 |
EM |
2017-04-05 | LYS | B:52 | B:52 | 45.0 | NA | S | -65.7 | 12.9 | 45.0 | NA | NA | ||||||
LYS | N:52 | N:52 | 46.0 | NA | S | -71.8 | 22.9 | 46.0 | NA | NA | |||||||||||||
5klv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2016-10-12 | LYS | B:52 | B:52 | 45.0 | 0.225 | S | -75.0 | 77.7 | 45.0 | 0.225 | 0.0 |
HOH |
2.797 |
HG2 |
O |
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5luf | 2 | P23004 | 89.29 | 0.0 |
EM |
2016-11-30 | LYS | B:52 | m:52 | 37.0 | 0.185 | S | -65.7 | 12.8 | 37.0 | 0.185 | 0.0 | ||||||
LYS | M:52 | n:52 | 41.0 | 0.205 | S | -71.9 | 22.9 | 41.0 | 0.205 | 0.0 | |||||||||||||
6nhg | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2019-06-19 | LYS | B:52 | B:52 | 51.0 | 0.255 | S | -76.7 | 77.4 | 51.0 | 0.255 | 0.0 |
HOH |
7.798 |
HA |
O |
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7o37 | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LYS | B:52 | B:52 | 83.0 | 0.415 | S | -80.9 | 72.2 | 83.0 | 0.415 | 0.0 | ||||||
LYS | L:52 | M:52 | 67.0 | 0.335 | S | -83.5 | 66.5 | 67.0 | 0.335 | 0.0 | |||||||||||||
7o3c | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LYS | B:52 | B:52 | 74.0 | 0.37 | S | -83.1 | 72.1 | 74.0 | 0.37 | 0.0 | ||||||
LYS | L:52 | M:52 | 67.0 | 0.335 | S | -77.7 | 75.4 | 67.0 | 0.335 | 0.0 | |||||||||||||
7o3e | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LYS | B:52 | B:52 | 75.0 | 0.375 | S | -82.8 | 70.7 | 75.0 | 0.375 | 0.0 | ||||||
LYS | I:52 | M:52 | 64.0 | 0.32 | S | -84.5 | 59.9 | 64.0 | 0.32 | 0.0 | |||||||||||||
7o3h | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LYS | B:52 | B:52 | 57.0 | 0.285 | S | -81.2 | 73.3 | 57.0 | 0.285 | 0.0 | ||||||
LYS | L:52 | M:52 | 66.0 | 0.33 | S | -82.9 | 69.1 | 66.0 | 0.33 | 0.0 | |||||||||||||
6q9e | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LYS | B:52 | a2:52 | 58.0 | 0.29 | S | -78.5 | 75.7 | 58.0 | 0.29 | 0.0 | ||||||
LYS | L:52 | a4:52 | 71.0 | 0.355 | S | -80.7 | 59.3 | 71.0 | 0.355 | 0.0 | |||||||||||||
6qbx | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LYS | B:52 | a2:52 | 61.0 | 0.305 | S | -78.7 | 69.2 | 61.0 | 0.305 | 0.0 | ||||||
LYS | L:52 | a4:52 | 62.0 | 0.31 | S | -74.2 | 66.8 | 62.0 | 0.31 | 0.0 | |||||||||||||
6qc2 | 30 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LYS | DA:52 | a2:52 | 41.0 | 0.205 | -69.4 | 84.7 | 41.0 | 0.205 | 0.0 | |||||||
LYS | NA:52 | a4:52 | 58.0 | 0.29 | S | -77.4 | 71.2 | 58.0 | 0.29 | 0.0 | |||||||||||||
6qc3 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LYS | B:52 | a2:52 | 83.0 | 0.415 | S | -77.3 | 85.0 | 83.0 | 0.415 | 0.0 | ||||||
LYS | L:52 | a4:52 | 79.0 | 0.395 | -73.6 | 86.4 | 79.0 | 0.395 | 0.0 | ||||||||||||||
6qc4 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LYS | B:52 | a2:52 | 69.0 | 0.345 | S | -79.2 | 77.1 | 69.0 | 0.345 | 0.0 | ||||||
LYS | L:52 | a4:52 | 51.0 | 0.255 | S | -74.4 | 69.2 | 51.0 | 0.255 | 0.0 | |||||||||||||
5j4z | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | LYS | DB:36 | AB:52 | 44.0 | NA | T | -60.1 | -10.3 | 44.0 | NA | NA | ||||||
LYS | OB:36 | AM:52 | 45.0 | NA | T | -60.2 | -10.3 | 45.0 | NA | NA | |||||||||||||
5j7y | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | LYS | DB:36 | AB:52 | 44.0 | NA | T | -60.1 | -10.3 | 44.0 | NA | NA | ||||||
LYS | OB:36 | AM:52 | 44.0 | NA | T | -60.1 | -10.4 | 44.0 | NA | NA | |||||||||||||
5j8k | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | LYS | DB:36 | AB:52 | 43.0 | NA | T | -60.2 | -10.3 | 43.0 | NA | NA | ||||||
LYS | OB:36 | AM:52 | 45.0 | NA | T | -60.2 | -10.3 | 45.0 | NA | NA | |||||||||||||
5nmi | 2 | P23004 | 89.34 | 0.0 |
X-RAY |
2017-06-14 | LYS | B:36 | B:52 | 51.0 | 0.255 | S | -73.3 | 85.4 | 51.0 | 0.255 | 0.0 | ||||||
LYS | M:36 | O:52 | 35.0 | 0.175 | E | -73.6 | 85.4 | 35.0 | 0.175 | 0.0 | |||||||||||||
6zfs | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | LYS | B:33 | B:52 | 59.0 | 0.295 | S | -72.8 | 83.5 | 59.0 | 0.295 | 0.0 | ||||||
6zft | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | LYS | B:33 | B:52 | 67.0 | 0.335 | S | -72.5 | 77.5 | 67.0 | 0.335 | 0.0 | ||||||
6zfu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | LYS | B:33 | B:52 | 70.0 | 0.35 | S | -72.2 | 83.7 | 70.0 | 0.35 | 0.0 | ||||||
6xvf | 2 | P23004 | 89.47 | 0.0 |
X-RAY |
2020-07-22 | LYS | B:31 | B:52 | 66.0 | 0.33 | S | -70.8 | 83.5 | 66.0 | 0.33 | 0.0 | ||||||
2bcc | 2 | ? | 87.91 | 0.0 |
X-RAY |
1999-08-02 | LYS | B:35 | B:52 | 83.0 | 0.415 | S | -85.0 | 42.9 | 83.0 | 0.415 | 0.0 | ||||||
3bcc | 2 | P23004 | 87.91 | 0.0 |
X-RAY |
1998-08-19 | LYS | B:35 | B:52 | 78.0 | 0.39 | S | -90.3 | 30.1 | 78.0 | 0.39 | 0.0 | ||||||
6haw | 2 | P23004 | 88.28 | 0.0 |
X-RAY |
2019-01-16 | LYS | B:31 | B:52 | 69.0 | 0.345 | S | -71.9 | 81.5 | 69.0 | 0.345 | 0.0 | ||||||
1bcc | 2 | P23004 | 87.68 | 0.0 |
X-RAY |
1998-08-19 | LYS | B:35 | B:52 | 80.0 | 0.4 | S | -90.7 | 45.5 | 80.0 | 0.4 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p22695-f1 | 1 | P22695 | 100.0 | 0.0 | LYS | A:66 | A:66 | 70.0 | 0.35 | S | -73.6 | 74.8 |