Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 21969911 | . | G | A | CCDS10601.1:NM_003366.2:c.323gGc>gAc_NP_003357.2:p.108G>D | Homo sapiens ubiquinol-cytochrome c reductase core protein II (UQCRC2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 10 | P22695 | 100.0 | 0.0 |
EM |
2017-08-30 | GLY | J:74 | K:108 | 12.0 | 0.16 | -83.0 | -178.4 | 5.0 | 0.067 | 0.093 |
B:P47985:0.013 K:P31930:0.067 |
||||||
GLY | U:74 | W:108 | 12.0 | 0.16 | -83.0 | 179.0 | 7.0 | 0.093 | 0.067 |
V:P31930:0.067 |
|||||||||||||
5xth | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | GLY | PB:74 | AK:108 | 13.0 | 0.173 | -83.0 | -178.4 | 5.0 | 0.067 | 0.106 |
QB:P31930:0.08 HB:P47985:0.027 |
||||||
GLY | AC:74 | AW:108 | 12.0 | 0.16 | -83.0 | 179.0 | 7.0 | 0.093 | 0.067 |
BC:P31930:0.067 |
|||||||||||||
5xti | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | GLY | PB:74 | AK:108 | 11.0 | 0.147 | -83.0 | -178.4 | 5.0 | 0.067 | 0.08 |
QB:P31930:0.053 HB:P47985:0.013 |
||||||
GLY | AC:74 | AW:108 | 11.0 | 0.147 | -83.0 | 179.0 | 6.0 | 0.08 | 0.067 |
BC:P31930:0.067 |
|||||||||||||
1sqb | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2004-09-07 | GLY | B:108 | B:94 | 6.0 | 0.08 | -80.8 | 170.2 | 0.0 | 0.0 | 0.08 |
A:P31800:0.013 I:P13272:0.067 |
HOH |
4.940 |
C |
O |
||
1sqp | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2005-11-01 | GLY | B:108 | B:94 | 13.0 | 0.173 | -89.1 | -177.8 | 1.0 | 0.013 | 0.16 |
A:P31800:0.027 I:P13272:0.147 |
HOH |
4.930 |
N |
O |
||
4d6t | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | GLY | B:108 | B:94 | 21.0 | 0.28 | -74.1 | -151.9 | 6.0 | 0.08 | 0.2 |
A:P31800:0.013 I:P13272:0.187 |
||||||
4d6u | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | GLY | B:108 | B:94 | 17.0 | 0.227 | -75.7 | -165.7 | 5.0 | 0.067 | 0.16 |
A:P31800:0.013 I:P13272:0.16 |
||||||
5okd | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2018-02-28 | GLY | B:108 | B:94 | 18.0 | 0.24 | -87.1 | 179.2 | 1.0 | 0.013 | 0.227 |
I:P13272:0.227 A:P31800:0.04 |
||||||
6fo6 | 3 | P23004 | 89.4 | 0.0 |
EM |
2018-02-28 | GLY | C:108 | B:94 | 17.0 | 0.227 | -66.9 | -166.4 | 14.0 | 0.187 | 0.04 |
B:P31800:0.04 |
||||||
GLY | L:108 | O:94 | 16.0 | 0.213 | -66.9 | -166.4 | 13.0 | 0.173 | 0.04 |
K:P31800:0.04 |
|||||||||||||
4d6t | 10 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | GLY | L:108 | O:94 | 19.0 | 0.253 | -74.9 | -154.3 | NA | NA | NA | |||||||
4d6u | 11 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | GLY | L:108 | O:94 | 17.0 | 0.227 | -74.3 | -165.0 | NA | NA | NA | |||||||
6fo0 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | GLY | B:108 | O:94 | 17.0 | 0.227 | -90.5 | -150.3 | 7.0 | 0.093 | 0.134 |
A:P31800:0.027 I:None:0.107 |
||||||
GLY | L:108 | B:94 | 17.0 | 0.227 | -90.3 | -150.3 | 7.0 | 0.093 | 0.134 |
K:P31800:0.027 S:None:0.12 |
|||||||||||||
6fo2 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | GLY | B:108 | O:94 | 15.0 | 0.2 | -82.2 | -148.7 | 5.0 | 0.067 | 0.133 |
A:P31800:0.04 I:P13272:0.107 |
||||||
GLY | L:108 | B:94 | 15.0 | 0.2 | -82.3 | -148.6 | 4.0 | 0.053 | 0.147 |
S:P13272:0.12 K:P31800:0.04 |
|||||||||||||
5gup | 46 | ? | 88.3 | 0.0 |
EM |
2017-03-29 | GLY | VA:108 | v:108 | 5.0 | 0.067 | -77.9 | 172.7 | 3.0 | 0.04 | 0.027 |
UA:F1SKM0:0.027 |
||||||
GLY | GB:108 | 6:108 | 10.0 | 0.133 | -68.4 | 162.8 | 0.0 | 0.0 | 0.133 |
OB:F1RNZ1:0.133 |
|||||||||||||
1be3 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-13 | GLY | B:94 | B:94 | 17.0 | 0.227 | -101.3 | 154.2 | 11.0 | 0.147 | 0.08 |
I:P13272:0.08 |
||||||
1bgy | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-06 | GLY | B:94 | B:94 | 17.0 | 0.227 | -78.3 | 175.8 | 10.0 | 0.133 | 0.094 |
I:P13272:0.093 |
||||||
GLY | M:94 | N:94 | 16.0 | 0.213 | -78.2 | 160.3 | 9.0 | 0.12 | 0.093 |
T:P13272:0.093 |
|||||||||||||
1l0l | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | GLY | B:94 | B:94 | 14.0 | 0.187 | -78.7 | -175.4 | 0.0 | 0.0 | 0.187 |
I:P13272:0.173 A:P31800:0.013 |
||||||
1l0n | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | GLY | B:94 | B:94 | 13.0 | 0.173 | -93.1 | -174.8 | 1.0 | 0.013 | 0.16 |
I:P13272:0.147 A:P31800:0.013 |
||||||
1ntk | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | GLY | B:94 | B:94 | 13.0 | 0.173 | -91.2 | 171.2 | 1.0 | 0.013 | 0.16 |
I:P13272:0.16 |
HOH |
2.518 |
O |
O |
||
1ntm | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | GLY | B:94 | B:94 | 12.0 | 0.16 | -86.7 | 175.5 | 1.0 | 0.013 | 0.147 |
A:P31800:0.013 I:P13272:0.147 |
HOH |
2.466 |
O |
O |
||
1ntz | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | GLY | B:94 | B:94 | 14.0 | 0.187 | -96.0 | -174.0 | 1.0 | 0.013 | 0.174 |
A:P31800:0.013 I:P13272:0.173 |
HOH |
5.515 |
N |
O |
||
1nu1 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | GLY | B:94 | B:94 | 10.0 | 0.133 | -82.0 | 179.8 | 1.0 | 0.013 | 0.12 |
I:P13272:0.107 A:P31800:0.027 |
||||||
1pp9 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | GLY | B:94 | B:94 | 19.0 | 0.253 | -80.8 | -175.5 | 1.0 | 0.013 | 0.24 |
A:P31800:0.027 I:P13272:0.24 |
HOH |
4.583 |
O |
O |
||
GLY | L:94 | O:94 | 17.0 | 0.227 | -85.5 | 179.2 | 0.0 | 0.0 | 0.227 |
K:P31800:0.027 S:P13272:0.213 |
HOH |
4.133 |
C |
O |
|||||||||
1ppj | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | GLY | B:94 | B:94 | 16.0 | 0.213 | -84.6 | -178.5 | 0.0 | 0.0 | 0.213 |
A:P31800:0.027 I:P13272:0.213 |
HOH |
2.689 |
O |
O |
||
GLY | L:94 | O:94 | 16.0 | 0.213 | -82.1 | -176.7 | 0.0 | 0.0 | 0.213 |
K:P31800:0.013 S:P13272:0.213 |
HOH |
4.549 |
O |
O |
|||||||||
1sqq | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-10-25 | GLY | B:94 | B:94 | 17.0 | 0.227 | -72.3 | -179.6 | 2.0 | 0.027 | 0.2 |
A:P31800:0.027 I:P13272:0.187 |
HOH |
5.331 |
N |
O |
||
1sqv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | GLY | B:94 | B:94 | 11.0 | 0.147 | -68.0 | 156.4 | 0.0 | 0.0 | 0.147 |
A:P31800:0.027 I:P13272:0.147 |
HOH |
4.977 |
N |
O |
||
1sqx | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | GLY | B:94 | B:94 | 11.0 | 0.147 | -89.4 | 173.0 | 0.0 | 0.0 | 0.147 |
A:P31800:0.027 G:P13272:0.133 |
HOH |
5.311 |
N |
O |
||
2a06 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-06-21 | GLY | B:94 | B:94 | 18.0 | 0.24 | -91.4 | -172.3 | 0.0 | 0.0 | 0.24 |
A:P31800:0.04 I:P13272:0.227 |
HOH |
2.763 |
O |
O |
||
GLY | L:94 | O:94 | 20.0 | 0.267 | -82.3 | -171.4 | 0.0 | 0.0 | 0.267 |
K:P31800:0.053 S:P13272:0.253 |
HOH |
3.534 |
C |
O |
|||||||||
2fyu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2006-08-29 | GLY | B:94 | B:94 | 13.0 | 0.173 | -84.7 | 180.0 | 0.0 | 0.0 | 0.173 |
A:P31800:0.053 I:P13272:0.16 |
HOH |
5.092 |
N |
O |
||
2ybb | 10 | P23004 | 89.29 | 0.0 |
EM |
2011-10-19 | GLY | J:94 | B:94 | 19.0 | 0.253 | -80.9 | -175.6 | 1.0 | 0.013 | 0.24 |
Q:P13272:0.24 I:P31800:0.027 |
HOH |
4.583 |
O |
O |
||
GLY | IA:94 | b:94 | 18.0 | 0.24 | -85.5 | 179.1 | 0.0 | 0.0 | 0.24 |
PA:P13272:0.24 HA:P31800:0.027 |
HOH |
4.133 |
C |
O |
|||||||||
5gpn | 2 | P23004 | 89.29 | 0.0 |
EM |
2017-04-05 | GLY | B:94 | B:94 | 25.0 | 0.333 | -78.2 | 175.9 | 24.0 | 0.32 | 0.013 |
I:P13272:0.013 |
||||||
GLY | N:94 | N:94 | 23.0 | 0.307 | -78.2 | 160.3 | 23.0 | 0.307 | 0.0 | ||||||||||||||
5klv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2016-10-12 | GLY | B:94 | B:94 | 14.0 | 0.187 | -80.0 | -178.0 | 12.0 | 0.16 | 0.027 |
A:P31800:0.027 |
||||||
5luf | 2 | P23004 | 89.29 | 0.0 |
EM |
2016-11-30 | GLY | B:94 | m:94 | 17.0 | 0.227 | -78.3 | 175.8 | 10.0 | 0.133 | 0.094 |
I:P13272:0.093 |
||||||
GLY | M:94 | n:94 | 16.0 | 0.213 | -78.2 | 160.3 | 9.0 | 0.12 | 0.093 |
T:P13272:0.093 |
|||||||||||||
6nhg | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2019-06-19 | GLY | B:94 | B:94 | 18.0 | 0.24 | -81.0 | -171.0 | 17.0 | 0.227 | 0.013 |
A:P31800:0.013 |
||||||
7o37 | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | GLY | B:94 | B:94 | 10.0 | 0.133 | -74.4 | 175.8 | 1.0 | 0.013 | 0.12 |
A:Q9CZ13:0.013 U:Q9CR68:0.107 |
||||||
GLY | L:94 | M:94 | 5.0 | 0.067 | -75.9 | 178.0 | 0.0 | 0.0 | 0.067 |
U:Q9CR68:0.067 |
|||||||||||||
7o3c | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | GLY | B:94 | B:94 | 11.0 | 0.147 | -74.8 | 176.4 | 1.0 | 0.013 | 0.134 |
U:Q9CR68:0.133 |
||||||
GLY | L:94 | M:94 | 10.0 | 0.133 | -77.6 | 169.3 | 0.0 | 0.0 | 0.133 |
U:Q9CR68:0.12 K:Q9CZ13:0.013 |
|||||||||||||
7o3e | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | GLY | B:94 | B:94 | 13.0 | 0.173 | -74.4 | 169.8 | 1.0 | 0.013 | 0.16 |
O:Q9CR68:0.16 |
||||||
GLY | I:94 | M:94 | 11.0 | 0.147 | -76.6 | 169.4 | 0.0 | 0.0 | 0.147 |
O:Q9CR68:0.147 |
|||||||||||||
7o3h | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | GLY | B:94 | B:94 | 12.0 | 0.16 | -74.6 | 173.3 | 1.0 | 0.013 | 0.147 |
U:Q9CR68:0.147 |
||||||
GLY | L:94 | M:94 | 10.0 | 0.133 | -77.1 | -179.5 | 2.0 | 0.027 | 0.106 |
U:Q9CR68:0.08 K:Q9CZ13:0.013 |
|||||||||||||
6q9e | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | GLY | B:94 | a2:94 | 7.0 | 0.093 | -75.4 | 150.7 | 5.0 | 0.067 | 0.026 |
I:None:0.027 |
||||||
GLY | L:94 | a4:94 | 4.0 | 0.053 | -72.3 | 160.3 | 1.0 | 0.013 | 0.04 |
K:W5Q5G6:0.013 S:None:0.027 |
|||||||||||||
6qbx | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | GLY | B:94 | a2:94 | 7.0 | 0.093 | -88.9 | 154.8 | 4.0 | 0.053 | 0.04 |
I:None:0.04 |
||||||
GLY | L:94 | a4:94 | 10.0 | 0.133 | -71.6 | 158.0 | 2.0 | 0.027 | 0.106 |
S:None:0.107 |
|||||||||||||
6qc2 | 30 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | GLY | DA:94 | a2:94 | 5.0 | 0.067 | -71.4 | 137.4 | 2.0 | 0.027 | 0.04 |
CA:None:0.04 |
||||||
GLY | NA:94 | a4:94 | 6.0 | 0.08 | -75.6 | 143.8 | 1.0 | 0.013 | 0.067 |
UA:None:0.053 MA:None:0.013 |
|||||||||||||
6qc3 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | GLY | B:94 | a2:94 | 10.0 | 0.133 | -69.3 | 153.9 | 7.0 | 0.093 | 0.04 |
A:None:0.013 I:None:0.027 |
||||||
GLY | L:94 | a4:94 | 7.0 | 0.093 | -69.6 | 164.5 | 0.0 | 0.0 | 0.093 |
K:None:0.013 S:None:0.08 |
|||||||||||||
6qc4 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | GLY | B:94 | a2:94 | 6.0 | 0.08 | -68.9 | 154.3 | 2.0 | 0.027 | 0.053 |
I:None:0.04 A:None:0.013 |
||||||
GLY | L:94 | a4:94 | 5.0 | 0.067 | -67.7 | 136.1 | 2.0 | 0.027 | 0.04 |
K:None:0.04 |
|||||||||||||
5j4z | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | GLY | DB:78 | AB:94 | 47.0 | 0.627 | -108.1 | -171.3 | 33.0 | 0.44 | 0.187 |
CB:W5Q5G6:0.067 KB:W5P2X9:0.12 |
||||||
GLY | OB:78 | AM:94 | 47.0 | 0.627 | -108.0 | -171.4 | 32.0 | 0.427 | 0.2 |
NB:W5Q5G6:0.067 VB:W5P2X9:0.133 |
|||||||||||||
5j7y | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | GLY | DB:78 | AB:94 | 45.0 | 0.6 | -108.0 | -171.3 | 32.0 | 0.427 | 0.173 |
CB:W5Q5G6:0.053 KB:W5P2X9:0.12 |
||||||
GLY | OB:78 | AM:94 | 47.0 | 0.627 | -108.0 | -171.4 | 33.0 | 0.44 | 0.187 |
NB:W5Q5G6:0.067 VB:W5P2X9:0.133 |
|||||||||||||
5j8k | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | GLY | DB:78 | AB:94 | 47.0 | 0.627 | -108.0 | -171.3 | 32.0 | 0.427 | 0.2 |
CB:W5Q5G6:0.067 KB:W5P2X9:0.12 |
||||||
GLY | OB:78 | AM:94 | 47.0 | 0.627 | -108.0 | -171.4 | 33.0 | 0.44 | 0.187 |
NB:W5Q5G6:0.067 VB:W5P2X9:0.133 |
|||||||||||||
5nmi | 2 | P23004 | 89.34 | 0.0 |
X-RAY |
2017-06-14 | GLY | B:78 | B:94 | 12.0 | 0.16 | -84.4 | -177.1 | 1.0 | 0.013 | 0.147 |
A:P31800:0.027 I:P13272:0.147 |
||||||
GLY | M:78 | O:94 | 12.0 | 0.16 | -84.4 | -176.9 | 0.0 | 0.0 | 0.16 |
L:P31800:0.027 T:P13272:0.16 |
|||||||||||||
6zfs | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | GLY | B:75 | B:94 | 17.0 | 0.227 | -81.7 | -179.8 | 1.0 | 0.013 | 0.214 |
I:P13272:0.213 A:P31800:0.04 |
||||||
6zft | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | GLY | B:75 | B:94 | 24.0 | 0.32 | -92.6 | -155.1 | 2.0 | 0.027 | 0.293 |
I:P13272:0.28 A:P31800:0.04 |
||||||
6zfu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | GLY | B:75 | B:94 | 17.0 | 0.227 | -83.9 | -178.2 | 1.0 | 0.013 | 0.214 |
I:P13272:0.213 A:P31800:0.04 |
||||||
6xvf | 2 | P23004 | 89.47 | 0.0 |
X-RAY |
2020-07-22 | GLY | B:73 | B:94 | 18.0 | 0.24 | -82.1 | -178.3 | 2.0 | 0.027 | 0.213 |
A:P31800:0.04 I:P13272:0.213 |
||||||
2bcc | 2 | ? | 87.91 | 0.0 |
X-RAY |
1999-08-02 | GLY | B:77 | B:94 | 13.0 | 0.173 | -87.9 | -170.6 | 5.0 | 0.067 | 0.106 |
I:None:0.053 A:None:0.053 |
||||||
3bcc | 2 | P23004 | 87.91 | 0.0 |
X-RAY |
1998-08-19 | GLY | B:77 | B:94 | 11.0 | 0.147 | -81.7 | -179.7 | 3.0 | 0.04 | 0.107 |
I:None:0.04 A:P31800:0.067 |
||||||
6haw | 2 | P23004 | 88.28 | 0.0 |
X-RAY |
2019-01-16 | GLY | B:73 | B:94 | 22.0 | 0.293 | -84.4 | -172.3 | 2.0 | 0.027 | 0.266 |
I:P13272:0.267 A:P31800:0.027 |
HOH |
8.620 |
O |
O |
||
1bcc | 2 | P23004 | 87.68 | 0.0 |
X-RAY |
1998-08-19 | GLY | B:77 | B:94 | 12.0 | 0.16 | -80.6 | -175.9 | 9.0 | 0.12 | 0.04 |
I:None:0.027 A:P13272:0.013 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p22695-f1 | 1 | P22695 | 100.0 | 0.0 | GLY | A:108 | A:108 | 17.0 | 0.227 | -80.0 | 169.1 |