Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 21976762 | . | G | A | CCDS10601.1:NM_003366.2:c.548cGg>cAg_NP_003357.2:p.183R>Q | Homo sapiens ubiquinol-cytochrome c reductase core protein II (UQCRC2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 10 | P22695 | 100.0 | 0.0 |
EM |
2017-08-30 | ARG | J:149 | K:183 | 160.0 | 0.711 | S | -64.1 | -38.4 | 61.0 | 0.271 | 0.44 |
U:P22695:0.44 |
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ARG | U:149 | W:183 | 181.0 | 0.804 | S | -64.8 | -38.5 | 73.0 | 0.324 | 0.48 |
J:P22695:0.48 |
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5xth | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | ARG | PB:149 | AK:183 | 161.0 | 0.716 | S | -64.1 | -38.4 | 61.0 | 0.271 | 0.445 |
AC:P22695:0.444 |
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ARG | AC:149 | AW:183 | 180.0 | 0.8 | S | -64.9 | -38.5 | 73.0 | 0.324 | 0.476 |
PB:P22695:0.476 |
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5xti | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | ARG | PB:149 | AK:183 | 163.0 | 0.724 | S | -64.2 | -38.3 | 61.0 | 0.271 | 0.453 |
AC:P22695:0.453 |
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ARG | AC:149 | AW:183 | 179.0 | 0.796 | S | -64.9 | -38.5 | 73.0 | 0.324 | 0.472 |
PB:P22695:0.471 |
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1sqb | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2004-09-07 | ARG | B:183 | B:169 | 163.0 | 0.724 | S | -95.0 | -2.8 | 66.0 | 0.293 | 0.431 |
B:P23004:0.431 |
HOH |
4.368 |
O |
O |
|
1sqp | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2005-11-01 | ARG | B:183 | B:169 | 144.0 | 0.64 | S | -87.5 | 9.9 | 50.0 | 0.222 | 0.418 |
B:P23004:0.418 |
HOH |
3.750 |
CZ |
O |
|
4d6t | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | ARG | B:183 | B:169 | 129.0 | 0.573 | -111.4 | -69.2 | 129.0 | 0.573 | 0.0 | |||||||
4d6u | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | ARG | B:183 | B:169 | 135.0 | 0.6 | S | -123.5 | -44.2 | 135.0 | 0.6 | 0.0 | ||||||
5okd | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2018-02-28 | ARG | B:183 | B:169 | 167.0 | 0.742 | S | -89.4 | -38.3 | 167.0 | 0.742 | 0.0 |
HOH |
8.023 |
NH1 |
O |
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6fo6 | 3 | P23004 | 89.4 | 0.0 |
EM |
2018-02-28 | ARG | C:183 | B:169 | 129.0 | 0.573 | S | -93.9 | -63.1 | 58.0 | 0.258 | 0.315 |
L:P23004:0.316 |
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ARG | L:183 | O:169 | 124.0 | 0.551 | S | -93.8 | -63.2 | 56.0 | 0.249 | 0.302 |
C:P23004:0.302 |
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4d6t | 10 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | ARG | L:183 | O:169 | 138.0 | 0.613 | -65.6 | -60.1 | NA | NA | NA | |||||||
4d6u | 11 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | ARG | L:183 | O:169 | 141.0 | 0.627 | S | -121.4 | -47.7 | NA | NA | NA | ||||||
6fo0 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | ARG | B:183 | O:169 | 133.0 | 0.591 | -114.0 | -60.3 | 43.0 | 0.191 | 0.4 |
L:P23004:0.4 |
||||||
ARG | L:183 | B:169 | 133.0 | 0.591 | -113.9 | -60.2 | 44.0 | 0.196 | 0.395 |
B:P23004:0.396 |
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6fo2 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | ARG | B:183 | O:169 | 127.0 | 0.564 | -113.1 | -59.7 | 47.0 | 0.209 | 0.355 |
L:P23004:0.356 |
||||||
ARG | L:183 | B:169 | 127.0 | 0.564 | -113.1 | -59.7 | 49.0 | 0.218 | 0.346 |
B:P23004:0.347 |
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5gup | 46 | ? | 88.3 | 0.0 |
EM |
2017-03-29 | ARG | VA:183 | v:183 | 151.0 | 0.671 | S | -67.9 | -38.9 | 105.0 | 0.467 | 0.204 |
GB:None:0.204 |
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ARG | GB:183 | 6:183 | 114.0 | 0.507 | S | -100.0 | 20.9 | 37.0 | 0.164 | 0.343 |
VA:None:0.342 |
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1be3 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-13 | ARG | B:169 | B:169 | 170.0 | 0.756 | S | -103.7 | -34.0 | 170.0 | 0.756 | 0.0 | ||||||
1bgy | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-06 | ARG | B:169 | B:169 | 178.0 | 0.791 | S | -116.4 | -45.7 | 86.0 | 0.382 | 0.409 |
M:P23004:0.409 |
|||||
ARG | M:169 | N:169 | 178.0 | 0.791 | S | -115.6 | -49.0 | 88.0 | 0.391 | 0.4 |
B:P23004:0.4 |
||||||||||||
1l0l | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | ARG | B:169 | B:169 | 157.0 | 0.698 | S | -80.7 | -21.4 | 157.0 | 0.698 | 0.0 | ||||||
1l0n | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | ARG | B:169 | B:169 | 152.0 | 0.676 | S | -100.8 | 10.2 | 152.0 | 0.676 | 0.0 | ||||||
1ntk | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ARG | B:169 | B:169 | 145.0 | 0.644 | S | -67.9 | -29.5 | 54.0 | 0.24 | 0.404 |
B:P23004:0.404 |
HOH |
4.185 |
N |
O |
|
1ntm | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ARG | B:169 | B:169 | 138.0 | 0.613 | S | -106.1 | 3.2 | 64.0 | 0.284 | 0.329 |
B:P23004:0.329 |
HOH |
4.586 |
O |
O |
|
1ntz | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ARG | B:169 | B:169 | 151.0 | 0.671 | S | -103.3 | 12.2 | 74.0 | 0.329 | 0.342 |
B:P23004:0.342 |
HOH |
9.748 |
N |
O |
|
1nu1 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ARG | B:169 | B:169 | 144.0 | 0.64 | S | -114.8 | -4.5 | 75.0 | 0.333 | 0.307 |
B:P23004:0.307 |
|||||
1pp9 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | ARG | B:169 | B:169 | 163.0 | 0.724 | S | -87.2 | -23.0 | 73.0 | 0.324 | 0.4 |
L:P23004:0.4 |
HOH |
2.847 |
O |
O |
|
ARG | L:169 | O:169 | 163.0 | 0.724 | S | -85.2 | -22.9 | 73.0 | 0.324 | 0.4 |
B:P23004:0.4 |
HOH |
3.619 |
O |
O |
||||||||
1ppj | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | ARG | B:169 | B:169 | 163.0 | 0.724 | S | -81.0 | -20.1 | 73.0 | 0.324 | 0.4 |
L:P23004:0.4 |
HOH |
2.924 |
O |
O |
|
ARG | L:169 | O:169 | 160.0 | 0.711 | S | -79.2 | -21.4 | 72.0 | 0.32 | 0.391 |
B:P23004:0.391 |
HOH |
4.047 |
NE |
O |
||||||||
1sqq | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-10-25 | ARG | B:169 | B:169 | 152.0 | 0.676 | S | -69.9 | -25.7 | 60.0 | 0.267 | 0.409 |
B:P23004:0.409 |
HOH |
3.759 |
O |
O |
|
1sqv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | ARG | B:169 | B:169 | 136.0 | 0.604 | S | -100.0 | 4.8 | 53.0 | 0.236 | 0.368 |
B:P23004:0.369 |
HOH |
3.930 |
O |
O |
|
1sqx | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | ARG | B:169 | B:169 | 153.0 | 0.68 | S | -78.6 | -14.8 | 63.0 | 0.28 | 0.4 |
B:P23004:0.4 |
HOH |
4.353 |
N |
O |
|
2a06 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-06-21 | ARG | B:169 | B:169 | 157.0 | 0.698 | S | -79.8 | -23.9 | 66.0 | 0.293 | 0.405 |
L:P23004:0.404 |
UNL HOH |
8.925 3.060 |
N O |
O1 O |
|
ARG | L:169 | O:169 | 156.0 | 0.693 | S | -80.8 | -26.3 | 68.0 | 0.302 | 0.391 |
B:P23004:0.391 |
UNL HOH |
3.700 4.677 |
O O |
O1 O |
||||||||
2fyu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2006-08-29 | ARG | B:169 | B:169 | 141.0 | 0.627 | S | -68.0 | -19.6 | 56.0 | 0.249 | 0.378 |
B:P23004:0.378 |
HOH |
7.961 |
NH2 |
O |
|
2ybb | 10 | P23004 | 89.29 | 0.0 |
EM |
2011-10-19 | ARG | J:169 | B:169 | 163.0 | 0.724 | S | -87.2 | -22.9 | 72.0 | 0.32 | 0.404 |
IA:P23004:0.404 |
HOH |
2.847 |
O |
O |
|
ARG | IA:169 | b:169 | 160.0 | 0.711 | S | -85.2 | -22.9 | 72.0 | 0.32 | 0.391 |
J:P23004:0.391 |
HOH |
3.619 |
O |
O |
||||||||
5gpn | 2 | P23004 | 89.29 | 0.0 |
EM |
2017-04-05 | ARG | B:169 | B:169 | 78.0 | NA | S | -116.3 | -45.7 | 65.0 | NA | NA |
N:P23004:NA |
|||||
ARG | N:169 | N:169 | 75.0 | NA | S | -115.6 | -48.9 | 67.0 | NA | NA |
B:P23004:NA |
||||||||||||
5klv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2016-10-12 | ARG | B:169 | B:169 | 145.0 | 0.644 | S | -82.7 | -29.2 | 61.0 | 0.271 | 0.373 |
B:P23004:0.373 |
GOL HOH |
2.730 5.649 |
O HH21 |
H12 O |
|
5luf | 2 | P23004 | 89.29 | 0.0 |
EM |
2016-11-30 | ARG | B:169 | m:169 | 178.0 | 0.791 | S | -116.4 | -45.7 | 88.0 | 0.391 | 0.4 |
M:P23004:0.4 |
|||||
ARG | M:169 | n:169 | 178.0 | 0.791 | S | -115.6 | -49.0 | 87.0 | 0.387 | 0.404 |
B:P23004:0.404 |
||||||||||||
6nhg | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2019-06-19 | ARG | B:169 | B:169 | 153.0 | 0.68 | S | -76.2 | -21.9 | 62.0 | 0.276 | 0.404 |
B:P23004:0.404 |
HOH |
4.069 |
HH12 |
O |
|
7o37 | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LYS | B:169 | B:169 | 124.0 | 0.62 | E | -92.5 | -17.8 | 31.0 | 0.155 | 0.465 |
L:Q9DB77:0.465 |
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LYS | L:169 | M:169 | 130.0 | 0.65 | S | -72.5 | -45.0 | 42.0 | 0.21 | 0.44 |
B:Q9DB77:0.44 |
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7o3c | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LYS | B:169 | B:169 | 123.0 | 0.615 | S | -98.0 | -20.5 | 32.0 | 0.16 | 0.455 |
L:Q9DB77:0.455 |
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LYS | L:169 | M:169 | 129.0 | 0.645 | S | -82.2 | -61.2 | 36.0 | 0.18 | 0.465 |
B:Q9DB77:0.465 |
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7o3e | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LYS | B:169 | B:169 | 118.0 | 0.59 | E | -94.6 | -38.9 | 34.0 | 0.17 | 0.42 |
I:Q9DB77:0.42 |
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LYS | I:169 | M:169 | 122.0 | 0.61 | S | -67.1 | -50.5 | 30.0 | 0.15 | 0.46 |
B:Q9DB77:0.46 |
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7o3h | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LYS | B:169 | B:169 | 130.0 | 0.65 | S | -93.8 | -56.0 | 36.0 | 0.18 | 0.47 |
L:Q9DB77:0.47 |
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LYS | L:169 | M:169 | 133.0 | 0.665 | S | -75.2 | -43.1 | 40.0 | 0.2 | 0.465 |
B:Q9DB77:0.465 |
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6q9e | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | B:169 | a2:169 | 151.0 | 0.671 | S | -88.3 | 6.5 | 63.0 | 0.28 | 0.391 |
L:W5Q0F9:0.391 |
|||||
ARG | L:169 | a4:169 | 147.0 | 0.653 | S | -88.5 | 16.7 | 59.0 | 0.262 | 0.391 |
B:W5Q0F9:0.391 |
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6qbx | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | B:169 | a2:169 | 141.0 | 0.627 | S | -92.6 | 14.7 | 55.0 | 0.244 | 0.383 |
L:W5Q0F9:0.382 |
|||||
ARG | L:169 | a4:169 | 146.0 | 0.649 | S | -94.9 | 10.5 | 66.0 | 0.293 | 0.356 |
B:W5Q0F9:0.356 |
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6qc2 | 30 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | DA:169 | a2:169 | 150.0 | 0.667 | S | -96.1 | 7.4 | 62.0 | 0.276 | 0.391 |
NA:W5Q0F9:0.391 |
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ARG | NA:169 | a4:169 | 136.0 | 0.604 | S | -112.2 | 6.0 | 79.0 | 0.351 | 0.253 |
DA:W5Q0F9:0.253 |
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6qc3 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | B:169 | a2:169 | 142.0 | 0.631 | S | -89.7 | 20.6 | 68.0 | 0.302 | 0.329 |
L:W5Q0F9:0.329 |
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ARG | L:169 | a4:169 | 145.0 | 0.644 | S | -91.0 | 15.6 | 78.0 | 0.347 | 0.297 |
B:W5Q0F9:0.298 |
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6qc4 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | B:169 | a2:169 | 142.0 | 0.631 | S | -91.2 | 11.3 | 59.0 | 0.262 | 0.369 |
L:W5Q0F9:0.369 |
|||||
ARG | L:169 | a4:169 | 158.0 | 0.702 | S | -88.3 | 9.2 | 48.0 | 0.213 | 0.489 |
B:W5Q0F9:0.489 |
||||||||||||
5j4z | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ARG | DB:153 | AB:169 | 78.0 | NA | -108.9 | -61.7 | 78.0 | NA | NA | |||||||
ARG | OB:153 | AM:169 | 77.0 | NA | -108.7 | -61.7 | 77.0 | NA | NA | ||||||||||||||
5j7y | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ARG | DB:153 | AB:169 | 77.0 | NA | -108.9 | -61.7 | 77.0 | NA | NA | |||||||
ARG | OB:153 | AM:169 | 77.0 | NA | -108.7 | -61.7 | 77.0 | NA | NA | ||||||||||||||
5j8k | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ARG | DB:153 | AB:169 | 76.0 | NA | -108.9 | -61.7 | 76.0 | NA | NA | |||||||
ARG | OB:153 | AM:169 | 78.0 | NA | -108.8 | -61.7 | 78.0 | NA | NA | ||||||||||||||
5nmi | 2 | P23004 | 89.34 | 0.0 |
X-RAY |
2017-06-14 | ARG | B:153 | B:169 | 147.0 | 0.653 | S | -94.1 | -72.2 | 65.0 | 0.289 | 0.364 |
M:P23004:0.364 |
|||||
ARG | M:153 | O:169 | 150.0 | 0.667 | S | -94.3 | -72.1 | 65.0 | 0.289 | 0.378 |
B:P23004:0.378 |
||||||||||||
6zfs | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ARG | B:150 | B:169 | 163.0 | 0.724 | S | -91.7 | -36.2 | 163.0 | 0.724 | 0.0 | ||||||
6zft | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ARG | B:150 | B:169 | 172.0 | 0.764 | S | -94.4 | -40.6 | 172.0 | 0.764 | 0.0 | ||||||
6zfu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ARG | B:150 | B:169 | 159.0 | 0.707 | S | -91.8 | -31.6 | 159.0 | 0.707 | 0.0 | ||||||
6xvf | 2 | P23004 | 89.47 | 0.0 |
X-RAY |
2020-07-22 | ARG | B:148 | B:169 | 167.0 | 0.742 | S | -89.0 | -37.1 | 68.0 | 0.302 | 0.44 |
B:P23004:0.44 |
|||||
2bcc | 2 | ? | 87.91 | 0.0 |
X-RAY |
1999-08-02 | ARG | B:152 | B:169 | 52.0 | NA | S | -140.4 | 73.8 | 52.0 | NA | NA | ||||||
3bcc | 2 | P23004 | 87.91 | 0.0 |
X-RAY |
1998-08-19 | ARG | B:152 | B:169 | 51.0 | NA | S | -173.4 | 92.8 | 14.0 | NA | NA |
B:P23004:NA |
|||||
6haw | 2 | P23004 | 88.28 | 0.0 |
X-RAY |
2019-01-16 | ARG | B:148 | B:169 | 174.0 | 0.773 | S | -91.0 | -34.8 | 174.0 | 0.773 | 0.0 | ||||||
1bcc | 2 | P23004 | 87.68 | 0.0 |
X-RAY |
1998-08-19 | ARG | B:152 | B:169 | 73.0 | NA | S | -126.7 | -32.8 | 36.0 | NA | NA |
B:P23004:NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p22695-f1 | 1 | P22695 | 100.0 | 0.0 | ARG | A:183 | A:183 | 144.0 | 0.64 | S | -88.8 | -23.3 |