Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 21983253 | . | G | A | CCDS10601.1:NM_003366.2:c.776cGa>cAa_NP_003357.2:p.259R>Q | Homo sapiens ubiquinol-cytochrome c reductase core protein II (UQCRC2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 10 | P22695 | 100.0 | 0.0 |
EM |
2017-08-30 | ARG | J:225 | K:259 | 64.0 | 0.284 | E | -78.5 | 151.6 | 54.0 | 0.24 | 0.044 |
U:P22695:0.044 |
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ARG | U:225 | W:259 | 72.0 | 0.32 | E | -132.7 | 154.9 | 71.0 | 0.316 | 0.004 |
J:P22695:0.004 |
||||||||||||
5xth | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | ARG | PB:225 | AK:259 | 63.0 | 0.28 | E | -78.5 | 151.6 | 53.0 | 0.236 | 0.044 |
AC:P22695:0.044 |
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ARG | AC:225 | AW:259 | 72.0 | 0.32 | E | -132.7 | 154.9 | 71.0 | 0.316 | 0.004 |
PB:P22695:0.004 |
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5xti | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | ARG | PB:225 | AK:259 | 62.0 | 0.276 | E | -78.5 | 151.7 | 53.0 | 0.236 | 0.04 |
AC:P22695:0.04 |
|||||
ARG | AC:225 | AW:259 | 71.0 | 0.316 | E | -132.7 | 154.9 | 70.0 | 0.311 | 0.005 |
PB:P22695:0.004 |
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1sqb | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2004-09-07 | ARG | B:259 | B:245 | 77.0 | 0.342 | E | -123.1 | 130.5 | 76.0 | 0.338 | 0.004 |
B:P23004:0.004 |
HOH |
2.714 |
N |
O |
|
1sqp | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2005-11-01 | ARG | B:259 | B:245 | 76.0 | 0.338 | E | -125.1 | 127.6 | 76.0 | 0.338 | 0.0 |
HOH |
2.677 |
O |
O |
||
4d6t | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | ARG | B:259 | B:245 | 69.0 | 0.307 | E | -131.1 | 100.0 | 69.0 | 0.307 | 0.0 | ||||||
4d6u | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | ARG | B:259 | B:245 | 69.0 | 0.307 | E | -131.3 | 109.2 | 69.0 | 0.307 | 0.0 | ||||||
5okd | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2018-02-28 | ARG | B:259 | B:245 | 66.0 | 0.293 | E | -132.2 | 102.2 | 66.0 | 0.293 | 0.0 |
HOH |
9.117 |
N |
O |
||
6fo6 | 3 | P23004 | 89.4 | 0.0 |
EM |
2018-02-28 | ARG | C:259 | B:245 | 77.0 | 0.342 | E | -144.8 | 97.6 | 74.0 | 0.329 | 0.013 |
L:P23004:0.013 |
|||||
ARG | L:259 | O:245 | 78.0 | 0.347 | E | -144.8 | 97.6 | 75.0 | 0.333 | 0.014 |
C:P23004:0.013 |
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4d6t | 10 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | ARG | L:259 | O:245 | 68.0 | 0.302 | E | -133.0 | 98.4 | NA | NA | NA | ||||||
4d6u | 11 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | ARG | L:259 | O:245 | 69.0 | 0.307 | E | -131.9 | 109.3 | NA | NA | NA | ||||||
6fo0 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | ARG | B:259 | O:245 | 85.0 | 0.378 | E | -130.7 | 143.3 | 82.0 | 0.364 | 0.014 |
L:P23004:0.013 |
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ARG | L:259 | B:245 | 84.0 | 0.373 | E | -130.7 | 143.2 | 81.0 | 0.36 | 0.013 |
B:P23004:0.013 |
||||||||||||
6fo2 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | ARG | B:259 | O:245 | 78.0 | 0.347 | E | -141.2 | 144.4 | 77.0 | 0.342 | 0.005 |
L:P23004:0.004 |
|||||
ARG | L:259 | B:245 | 76.0 | 0.338 | E | -141.2 | 144.4 | 76.0 | 0.338 | 0.0 | |||||||||||||
5gup | 46 | ? | 88.3 | 0.0 |
EM |
2017-03-29 | ARG | VA:259 | v:259 | 58.0 | 0.258 | -138.7 | 96.1 | 58.0 | 0.258 | 0.0 | |||||||
ARG | GB:259 | 6:259 | 89.0 | 0.396 | E | -132.8 | 97.6 | 80.0 | 0.356 | 0.04 |
VA:None:0.04 |
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1be3 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-13 | ARG | B:245 | B:245 | 81.0 | 0.36 | E | -121.9 | 119.7 | 81.0 | 0.36 | 0.0 | ||||||
1bgy | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-06 | ARG | B:245 | B:245 | 79.0 | 0.351 | E | -119.8 | 123.2 | 77.0 | 0.342 | 0.009 |
M:P23004:0.009 |
|||||
ARG | M:245 | N:245 | 76.0 | 0.338 | E | -117.9 | 124.2 | 73.0 | 0.324 | 0.014 |
B:P23004:0.013 |
||||||||||||
1l0l | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | ARG | B:245 | B:245 | 80.0 | 0.356 | E | -121.9 | 118.9 | 80.0 | 0.356 | 0.0 | ||||||
1l0n | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | ARG | B:245 | B:245 | 70.0 | 0.311 | E | -128.3 | 123.4 | 70.0 | 0.311 | 0.0 | ||||||
1ntk | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ARG | B:245 | B:245 | 73.0 | 0.324 | E | -123.5 | 131.3 | 73.0 | 0.324 | 0.0 |
HOH |
2.933 |
NH1 |
O |
||
1ntm | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ARG | B:245 | B:245 | 75.0 | 0.333 | E | -125.4 | 131.1 | 75.0 | 0.333 | 0.0 |
HOH |
2.867 |
NH1 |
O |
||
1ntz | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ARG | B:245 | B:245 | 70.0 | 0.311 | E | -121.1 | 122.6 | 70.0 | 0.311 | 0.0 |
HOH |
9.106 |
O |
O |
||
1nu1 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ARG | B:245 | B:245 | 77.0 | 0.342 | E | -126.3 | 127.4 | 77.0 | 0.342 | 0.0 | ||||||
1pp9 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | ARG | B:245 | B:245 | 74.0 | 0.329 | E | -117.0 | 127.4 | 74.0 | 0.329 | 0.0 |
HOH |
2.688 |
NH1 |
O |
||
ARG | L:245 | O:245 | 74.0 | 0.329 | E | -116.9 | 125.9 | 74.0 | 0.329 | 0.0 |
HOH |
2.734 |
NH1 |
O |
|||||||||
1ppj | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | ARG | B:245 | B:245 | 74.0 | 0.329 | E | -115.2 | 121.7 | 74.0 | 0.329 | 0.0 |
HOH |
2.799 |
NH1 |
O |
||
ARG | L:245 | O:245 | 72.0 | 0.32 | E | -114.0 | 123.2 | 71.0 | 0.316 | 0.004 |
B:P23004:0.004 |
HOH |
2.685 |
NH2 |
O |
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1sqq | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-10-25 | ARG | B:245 | B:245 | 79.0 | 0.351 | E | -142.5 | 114.6 | 77.0 | 0.342 | 0.009 |
B:P23004:0.009 |
HOH |
2.984 |
NH1 |
O |
|
1sqv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | ARG | B:245 | B:245 | 80.0 | 0.356 | E | -122.8 | 137.7 | 78.0 | 0.347 | 0.009 |
B:P23004:0.009 |
HOH |
2.735 |
NH1 |
O |
|
1sqx | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | ARG | B:245 | B:245 | 76.0 | 0.338 | E | -124.7 | 127.1 | 76.0 | 0.338 | 0.0 |
HOH |
3.177 |
NE |
O |
||
2a06 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-06-21 | ARG | B:245 | B:245 | 71.0 | 0.316 | E | -112.8 | 121.6 | 71.0 | 0.316 | 0.0 |
UNL UNL HOH |
4.093 7.725 2.554 |
NH2 N NH2 |
O1 O1 O |
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ARG | L:245 | O:245 | 70.0 | 0.311 | E | -110.4 | 120.8 | 69.0 | 0.307 | 0.004 |
B:P23004:0.004 |
UNL HOH |
6.036 2.844 |
CD NH1 |
O1 O |
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2fyu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2006-08-29 | ARG | B:245 | B:245 | 69.0 | 0.307 | E | -129.4 | 113.3 | 69.0 | 0.307 | 0.0 |
HOH |
9.223 |
O |
O |
||
2ybb | 10 | P23004 | 89.29 | 0.0 |
EM |
2011-10-19 | ARG | J:245 | B:245 | 75.0 | 0.333 | E | -116.9 | 127.4 | 75.0 | 0.333 | 0.0 |
HOH |
2.687 |
NH1 |
O |
||
ARG | IA:245 | b:245 | 76.0 | 0.338 | E | -116.8 | 125.9 | 76.0 | 0.338 | 0.0 |
HOH |
2.734 |
NH1 |
O |
|||||||||
5gpn | 2 | P23004 | 89.29 | 0.0 |
EM |
2017-04-05 | ARG | B:245 | B:245 | 86.0 | NA | E | -119.8 | 123.2 | 86.0 | NA | NA | ||||||
ARG | N:245 | N:245 | 89.0 | NA | E | -117.9 | 124.2 | 89.0 | NA | NA | |||||||||||||
5klv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2016-10-12 | ARG | B:245 | B:245 | 72.0 | 0.32 | E | -126.2 | 117.6 | 72.0 | 0.32 | 0.0 |
GOL HOH |
2.047 2.351 |
HE H |
HO2 O |
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5luf | 2 | P23004 | 89.29 | 0.0 |
EM |
2016-11-30 | ARG | B:245 | m:245 | 80.0 | 0.356 | E | -119.8 | 123.2 | 77.0 | 0.342 | 0.014 |
M:P23004:0.013 |
|||||
ARG | M:245 | n:245 | 75.0 | 0.333 | E | -117.9 | 124.3 | 72.0 | 0.32 | 0.013 |
B:P23004:0.013 |
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6nhg | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2019-06-19 | ARG | B:245 | B:245 | 72.0 | 0.32 | E | -121.4 | 131.3 | 72.0 | 0.32 | 0.0 |
HOH |
6.804 |
HD2 |
O |
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7o37 | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | ARG | B:245 | B:245 | 67.0 | 0.298 | E | -124.4 | 131.0 | 42.0 | 0.187 | 0.111 |
L:Q9DB77:0.111 |
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ARG | L:245 | M:245 | 57.0 | 0.253 | E | -131.6 | 125.4 | 43.0 | 0.191 | 0.062 |
B:Q9DB77:0.062 |
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7o3c | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | ARG | B:245 | B:245 | 62.0 | 0.276 | E | -136.8 | 92.3 | 42.0 | 0.187 | 0.089 |
L:Q9DB77:0.089 |
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ARG | L:245 | M:245 | 68.0 | 0.302 | E | -127.8 | 115.3 | 48.0 | 0.213 | 0.089 |
B:Q9DB77:0.089 |
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7o3e | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | ARG | B:245 | B:245 | 77.0 | 0.342 | E | -127.0 | 127.3 | 46.0 | 0.204 | 0.138 |
I:Q9DB77:0.138 |
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ARG | I:245 | M:245 | 72.0 | 0.32 | E | -121.5 | 124.9 | 46.0 | 0.204 | 0.116 |
B:Q9DB77:0.116 |
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7o3h | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | ARG | B:245 | B:245 | 63.0 | 0.28 | E | -127.1 | 130.4 | 44.0 | 0.196 | 0.084 |
L:Q9DB77:0.084 |
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ARG | L:245 | M:245 | 63.0 | 0.28 | E | -114.2 | 120.9 | 41.0 | 0.182 | 0.098 |
B:Q9DB77:0.098 |
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6q9e | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | B:245 | a2:245 | 65.0 | 0.289 | E | -113.6 | 150.8 | 60.0 | 0.267 | 0.022 |
L:W5Q0F9:0.022 |
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ARG | L:245 | a4:245 | 104.0 | 0.462 | E | -109.8 | 132.5 | 74.0 | 0.329 | 0.133 |
B:W5Q0F9:0.133 |
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6qbx | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | B:245 | a2:245 | 80.0 | 0.356 | E | -117.2 | 141.8 | 61.0 | 0.271 | 0.085 |
L:W5Q0F9:0.084 |
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ARG | L:245 | a4:245 | 115.0 | 0.511 | E | -111.8 | 131.5 | 86.0 | 0.382 | 0.129 |
B:W5Q0F9:0.129 |
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6qc2 | 30 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | DA:245 | a2:245 | 68.0 | 0.302 | E | -110.4 | 128.9 | 58.0 | 0.258 | 0.044 |
NA:W5Q0F9:0.044 |
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ARG | NA:245 | a4:245 | 115.0 | 0.511 | E | -111.7 | 123.1 | 69.0 | 0.307 | 0.204 |
DA:W5Q0F9:0.204 |
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6qc3 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | B:245 | a2:245 | 73.0 | 0.324 | E | -103.7 | 150.5 | 73.0 | 0.324 | 0.0 | ||||||
ARG | L:245 | a4:245 | 121.0 | 0.538 | E | -104.0 | 130.6 | 72.0 | 0.32 | 0.218 |
B:W5Q0F9:0.218 |
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6qc4 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ARG | B:245 | a2:245 | 67.0 | 0.298 | E | -112.4 | 118.8 | 66.0 | 0.293 | 0.005 |
L:W5Q0F9:0.004 |
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ARG | L:245 | a4:245 | 120.0 | 0.533 | E | -116.2 | 125.1 | 74.0 | 0.329 | 0.204 |
B:W5Q0F9:0.204 |
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5j4z | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ARG | DB:229 | AB:245 | 81.0 | NA | -102.1 | 126.6 | 81.0 | NA | NA | |||||||
ARG | OB:229 | AM:245 | 81.0 | NA | -102.2 | 126.6 | 81.0 | NA | NA | ||||||||||||||
5j7y | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ARG | DB:229 | AB:245 | 82.0 | NA | -102.1 | 126.6 | 82.0 | NA | NA | |||||||
ARG | OB:229 | AM:245 | 82.0 | NA | -102.2 | 126.6 | 82.0 | NA | NA | ||||||||||||||
5j8k | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ARG | DB:229 | AB:245 | 82.0 | NA | -102.1 | 126.7 | 82.0 | NA | NA | |||||||
ARG | OB:229 | AM:245 | 82.0 | NA | -102.2 | 126.5 | 82.0 | NA | NA | ||||||||||||||
5nmi | 2 | P23004 | 89.34 | 0.0 |
X-RAY |
2017-06-14 | ARG | B:229 | B:245 | 62.0 | 0.276 | E | -125.5 | 98.8 | 62.0 | 0.276 | 0.0 | ||||||
ARG | M:229 | O:245 | 61.0 | 0.271 | E | -125.4 | 98.4 | 61.0 | 0.271 | 0.0 | |||||||||||||
6zfs | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ARG | B:226 | B:245 | 70.0 | 0.311 | E | -125.6 | 105.7 | 70.0 | 0.311 | 0.0 |
HOH |
4.693 |
NH2 |
O |
||
6zft | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ARG | B:226 | B:245 | 71.0 | 0.316 | E | -132.2 | 102.9 | 71.0 | 0.316 | 0.0 | ||||||
6zfu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ARG | B:226 | B:245 | 69.0 | 0.307 | E | -129.4 | 102.4 | 69.0 | 0.307 | 0.0 | ||||||
6xvf | 2 | P23004 | 89.47 | 0.0 |
X-RAY |
2020-07-22 | ARG | B:224 | B:245 | 69.0 | 0.307 | E | -126.6 | 106.7 | 69.0 | 0.307 | 0.0 | ||||||
2bcc | 2 | ? | 87.91 | 0.0 |
X-RAY |
1999-08-02 | ARG | B:228 | B:245 | 76.0 | 0.338 | E | -113.5 | 130.3 | 76.0 | 0.338 | 0.0 | ||||||
3bcc | 2 | P23004 | 87.91 | 0.0 |
X-RAY |
1998-08-19 | ARG | B:228 | B:245 | 77.0 | 0.342 | E | -92.5 | 141.4 | 72.0 | 0.32 | 0.022 |
B:P23004:0.022 |
|||||
6haw | 2 | P23004 | 88.28 | 0.0 |
X-RAY |
2019-01-16 | ARG | B:219 | B:245 | 71.0 | 0.316 | E | -125.0 | 102.1 | 71.0 | 0.316 | 0.0 | ||||||
1bcc | 2 | P23004 | 87.68 | 0.0 |
X-RAY |
1998-08-19 | ARG | B:228 | B:245 | 76.0 | 0.338 | E | -112.1 | 130.7 | 69.0 | 0.307 | 0.031 |
B:P23004:0.031 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p22695-f1 | 1 | P22695 | 100.0 | 0.0 | ARG | A:259 | A:259 | 71.0 | 0.316 | E | -122.3 | 126.6 |