Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 21991875 | . | C | A | CCDS10601.1:NM_003366.2:c.1132Ctg>Atg_NP_003357.2:p.378L>M | Homo sapiens ubiquinol-cytochrome c reductase core protein II (UQCRC2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 10 | P22695 | 100.0 | 0.0 |
EM |
2017-08-30 | LEU | J:344 | K:378 | 18.0 | 0.106 | H | -68.0 | -36.8 | 17.0 | 0.1 | 0.006 |
B:P47985:0.006 |
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LEU | U:344 | W:378 | 34.0 | 0.2 | H | -69.4 | -36.9 | 18.0 | 0.106 | 0.094 |
M:P47985:0.094 |
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5xth | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | LEU | PB:344 | AK:378 | 19.0 | 0.112 | H | -68.0 | -36.8 | 18.0 | 0.106 | 0.006 |
HB:P47985:0.006 |
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LEU | AC:344 | AW:378 | 33.0 | 0.194 | H | -69.3 | -36.9 | 18.0 | 0.106 | 0.088 |
SB:P47985:0.088 |
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5xti | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | LEU | PB:344 | AK:378 | 17.0 | 0.1 | H | -68.0 | -36.8 | 16.0 | 0.094 | 0.006 |
HB:P47985:0.006 |
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LEU | AC:344 | AW:378 | 33.0 | 0.194 | H | -69.3 | -36.9 | 18.0 | 0.106 | 0.088 |
SB:P47985:0.088 |
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1sqb | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2004-09-07 | LEU | B:378 | B:364 | 23.0 | 0.135 | H | -66.9 | -45.1 | 4.0 | 0.024 | 0.111 |
I:P13272:0.112 |
HOH |
6.499 |
N |
O |
|
1sqp | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2005-11-01 | LEU | B:378 | B:364 | 24.0 | 0.141 | H | -66.4 | -50.8 | 5.0 | 0.029 | 0.112 |
I:P13272:0.112 |
HOH |
8.784 |
CD2 |
O |
|
4d6t | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | LEU | B:378 | B:364 | 25.0 | 0.147 | H | -64.0 | -50.3 | 25.0 | 0.147 | 0.0 | ||||||
4d6u | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | LEU | B:378 | B:364 | 25.0 | 0.147 | H | -67.8 | -47.6 | 25.0 | 0.147 | 0.0 | ||||||
5okd | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2018-02-28 | LEU | B:378 | B:364 | 26.0 | 0.153 | H | -55.9 | -48.1 | 26.0 | 0.153 | 0.0 |
HOH |
5.977 |
N |
O |
||
6fo6 | 3 | P23004 | 89.4 | 0.0 |
EM |
2018-02-28 | LEU | C:378 | B:364 | 23.0 | 0.135 | H | -65.3 | -41.9 | 23.0 | 0.135 | 0.0 | ||||||
LEU | L:378 | O:364 | 22.0 | 0.129 | H | -65.2 | -42.0 | 22.0 | 0.129 | 0.0 | |||||||||||||
4d6t | 10 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | LEU | L:378 | O:364 | 25.0 | 0.147 | H | -64.9 | -48.8 | NA | NA | NA | ||||||
4d6u | 11 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | LEU | L:378 | O:364 | 26.0 | 0.153 | H | -68.9 | -46.4 | NA | NA | NA | ||||||
6fo0 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | LEU | B:378 | O:364 | 24.0 | 0.141 | H | -62.8 | -39.0 | 24.0 | 0.141 | 0.0 | ||||||
LEU | L:378 | B:364 | 25.0 | 0.147 | H | -62.9 | -38.8 | 25.0 | 0.147 | 0.0 | |||||||||||||
6fo2 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | LEU | B:378 | O:364 | 24.0 | 0.141 | H | -63.1 | -47.8 | 24.0 | 0.141 | 0.0 | ||||||
LEU | L:378 | B:364 | 24.0 | 0.141 | H | -63.1 | -47.8 | 24.0 | 0.141 | 0.0 | |||||||||||||
5gup | 46 | ? | 88.3 | 0.0 |
EM |
2017-03-29 | LEU | VA:378 | v:378 | 12.0 | 0.071 | H | -60.3 | -51.0 | 7.0 | 0.041 | 0.03 |
PB:F1RNZ1:0.029 |
|||||
LEU | GB:378 | 6:378 | 31.0 | 0.182 | H | -71.0 | -30.7 | 16.0 | 0.094 | 0.088 |
OB:F1RNZ1:0.088 |
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1be3 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-13 | LEU | B:364 | B:364 | 22.0 | 0.129 | H | -50.0 | -58.7 | 22.0 | 0.129 | 0.0 | ||||||
1bgy | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-06 | LEU | B:364 | B:364 | 23.0 | 0.135 | H | -50.2 | -55.1 | 23.0 | 0.135 | 0.0 | ||||||
LEU | M:364 | N:364 | 24.0 | 0.141 | H | -42.1 | -60.6 | 24.0 | 0.141 | 0.0 | |||||||||||||
1l0l | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | LEU | B:364 | B:364 | 25.0 | 0.147 | H | -60.8 | -53.8 | 7.0 | 0.041 | 0.106 |
I:P13272:0.106 |
|||||
1l0n | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | LEU | B:364 | B:364 | 26.0 | 0.153 | H | -62.1 | -48.6 | 6.0 | 0.035 | 0.118 |
I:P13272:0.118 |
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1ntk | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | LEU | B:364 | B:364 | 22.0 | 0.129 | H | -52.6 | -56.7 | 7.0 | 0.041 | 0.088 |
I:P13272:0.088 |
HOH |
6.913 |
CD2 |
O |
|
1ntm | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | LEU | B:364 | B:364 | 22.0 | 0.129 | H | -65.2 | -59.8 | 3.0 | 0.018 | 0.111 |
I:P13272:0.112 |
HOH |
4.050 |
CD1 |
O |
|
1ntz | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | LEU | B:364 | B:364 | 25.0 | 0.147 | H | -63.0 | -43.3 | 7.0 | 0.041 | 0.106 |
I:P13272:0.106 |
HOH |
4.701 |
CD1 |
O |
|
1nu1 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | LEU | B:364 | B:364 | 21.0 | 0.124 | H | -48.4 | -59.4 | 5.0 | 0.029 | 0.095 |
I:P13272:0.094 |
|||||
1pp9 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | LEU | B:364 | B:364 | 23.0 | 0.135 | H | -56.8 | -47.3 | 23.0 | 0.135 | 0.0 |
HOH |
6.800 |
CD2 |
O |
||
LEU | L:364 | O:364 | 23.0 | 0.135 | H | -55.0 | -47.1 | 23.0 | 0.135 | 0.0 |
HOH |
6.492 |
CD2 |
O |
|||||||||
1ppj | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | LEU | B:364 | B:364 | 20.0 | 0.118 | H | -65.2 | -46.8 | 20.0 | 0.118 | 0.0 |
HOH |
4.123 |
CD1 |
O |
||
LEU | L:364 | O:364 | 23.0 | 0.135 | H | -64.8 | -48.0 | 23.0 | 0.135 | 0.0 |
HOH |
7.814 |
CD1 |
O |
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1sqq | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-10-25 | LEU | B:364 | B:364 | 22.0 | 0.129 | H | -65.5 | -50.3 | 8.0 | 0.047 | 0.082 |
I:P13272:0.082 |
HOH |
7.894 |
CD2 |
O |
|
1sqv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | LEU | B:364 | B:364 | 24.0 | 0.141 | H | -64.0 | -55.1 | 5.0 | 0.029 | 0.112 |
I:P13272:0.112 |
HOH |
4.887 |
CD1 |
O |
|
1sqx | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | LEU | B:364 | B:364 | 20.0 | 0.118 | H | -66.1 | -46.0 | 4.0 | 0.024 | 0.094 |
G:P13272:0.094 |
HOH |
5.141 |
N |
O |
|
2a06 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-06-21 | LEU | B:364 | B:364 | 20.0 | 0.118 | H | -61.6 | -47.9 | 20.0 | 0.118 | 0.0 |
PO4 HOH |
6.342 4.206 |
CD1 CD1 |
O3 O |
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LEU | L:364 | O:364 | 22.0 | 0.129 | H | -61.0 | -50.1 | 22.0 | 0.129 | 0.0 |
UNL UNL UNL HOH |
9.399 5.926 9.438 6.486 |
O N CD1 CD2 |
O2 O1 O1 O |
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2fyu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2006-08-29 | LEU | B:364 | B:364 | 26.0 | 0.153 | H | -56.9 | -50.8 | 4.0 | 0.024 | 0.129 |
I:P13272:0.129 |
HOH |
4.264 |
CD1 |
O |
|
2ybb | 10 | P23004 | 89.29 | 0.0 |
EM |
2011-10-19 | LEU | J:364 | B:364 | 22.0 | 0.129 | H | -56.7 | -47.4 | 22.0 | 0.129 | 0.0 |
HOH |
6.799 |
CD2 |
O |
||
LEU | IA:364 | b:364 | 24.0 | 0.141 | H | -55.0 | -47.1 | 24.0 | 0.141 | 0.0 |
HOH |
6.492 |
CD2 |
O |
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5gpn | 2 | P23004 | 89.29 | 0.0 |
EM |
2017-04-05 | LEU | B:364 | B:364 | 42.0 | NA | H | -50.0 | -55.2 | 42.0 | NA | NA | ||||||
LEU | N:364 | N:364 | 42.0 | NA | H | -42.2 | -60.5 | 42.0 | NA | NA | |||||||||||||
5klv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2016-10-12 | LEU | B:364 | B:364 | 25.0 | 0.147 | H | -63.6 | -43.9 | 25.0 | 0.147 | 0.0 |
HOH |
9.902 |
HD21 |
O |
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5luf | 2 | P23004 | 89.29 | 0.0 |
EM |
2016-11-30 | LEU | B:364 | m:364 | 23.0 | 0.135 | H | -50.2 | -55.1 | 23.0 | 0.135 | 0.0 | ||||||
LEU | M:364 | n:364 | 24.0 | 0.141 | H | -42.1 | -60.7 | 24.0 | 0.141 | 0.0 | |||||||||||||
6nhg | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2019-06-19 | LEU | B:364 | B:364 | 25.0 | 0.147 | H | -67.0 | -52.6 | 25.0 | 0.147 | 0.0 |
HOH |
8.105 |
HD21 |
O |
||
7o37 | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LEU | B:364 | B:364 | 19.0 | 0.112 | H | -68.7 | -41.5 | 1.0 | 0.006 | 0.106 |
U:Q9CR68:0.106 |
|||||
LEU | L:364 | M:364 | 23.0 | 0.135 | H | -67.9 | -41.2 | 23.0 | 0.135 | 0.0 | |||||||||||||
7o3c | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LEU | B:364 | B:364 | 24.0 | 0.141 | H | -66.3 | -44.0 | 8.0 | 0.047 | 0.094 |
U:Q9CR68:0.094 |
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LEU | L:364 | M:364 | 22.0 | 0.129 | H | -68.5 | -47.6 | 22.0 | 0.129 | 0.0 | |||||||||||||
7o3e | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LEU | B:364 | B:364 | 16.0 | 0.094 | H | -66.9 | -41.8 | 2.0 | 0.012 | 0.082 |
O:Q9CR68:0.082 |
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LEU | I:364 | M:364 | 21.0 | 0.124 | H | -66.4 | -41.3 | 21.0 | 0.124 | 0.0 | |||||||||||||
7o3h | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | LEU | B:364 | B:364 | 21.0 | 0.124 | H | -65.7 | -43.3 | 1.0 | 0.006 | 0.118 |
U:Q9CR68:0.118 |
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LEU | L:364 | M:364 | 23.0 | 0.135 | H | -66.6 | -42.6 | 23.0 | 0.135 | 0.0 | |||||||||||||
6q9e | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LEU | B:364 | a2:364 | 22.0 | 0.129 | H | -72.3 | -38.8 | 22.0 | 0.129 | 0.0 | ||||||
LEU | L:364 | a4:364 | 18.0 | 0.106 | H | -71.9 | -37.6 | 11.0 | 0.065 | 0.041 |
S:None:0.041 |
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6qbx | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LEU | B:364 | a2:364 | 20.0 | 0.118 | H | -67.0 | -34.3 | 20.0 | 0.118 | 0.0 | ||||||
LEU | L:364 | a4:364 | 23.0 | 0.135 | H | -69.3 | -39.2 | 21.0 | 0.124 | 0.011 |
S:None:0.012 |
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6qc2 | 30 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LEU | DA:364 | a2:364 | 23.0 | 0.135 | H | -71.8 | -36.9 | 23.0 | 0.135 | 0.0 | ||||||
LEU | NA:364 | a4:364 | 22.0 | 0.129 | H | -70.5 | -40.9 | 22.0 | 0.129 | 0.0 | |||||||||||||
6qc3 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LEU | B:364 | a2:364 | 26.0 | 0.153 | H | -70.4 | -30.0 | 26.0 | 0.153 | 0.0 | ||||||
LEU | L:364 | a4:364 | 21.0 | 0.124 | H | -71.1 | -35.5 | 8.0 | 0.047 | 0.077 |
S:None:0.076 |
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6qc4 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | LEU | B:364 | a2:364 | 24.0 | 0.141 | H | -68.8 | -42.5 | 24.0 | 0.141 | 0.0 | ||||||
LEU | L:364 | a4:364 | 16.0 | 0.094 | H | -73.2 | -40.2 | 7.0 | 0.041 | 0.053 |
S:None:0.053 |
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5j4z | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | LEU | DB:348 | AB:364 | 38.0 | NA | I | -69.8 | -46.3 | 38.0 | NA | NA | ||||||
LEU | OB:348 | AM:364 | 38.0 | NA | I | -69.7 | -46.2 | 38.0 | NA | NA | |||||||||||||
5j7y | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | LEU | DB:348 | AB:364 | 39.0 | NA | I | -69.8 | -46.3 | 39.0 | NA | NA | ||||||
LEU | OB:348 | AM:364 | 37.0 | NA | I | -69.7 | -46.2 | 37.0 | NA | NA | |||||||||||||
5j8k | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | LEU | DB:348 | AB:364 | 38.0 | NA | I | -69.8 | -46.2 | 38.0 | NA | NA | ||||||
LEU | OB:348 | AM:364 | 37.0 | NA | I | -69.6 | -46.3 | 37.0 | NA | NA | |||||||||||||
5nmi | 2 | P23004 | 89.34 | 0.0 |
X-RAY |
2017-06-14 | LEU | B:348 | B:364 | 19.0 | 0.112 | H | -64.8 | -54.0 | 19.0 | 0.112 | 0.0 | ||||||
LEU | M:348 | O:364 | 18.0 | 0.106 | H | -64.9 | -53.8 | 18.0 | 0.106 | 0.0 | |||||||||||||
6zfs | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | LEU | B:345 | B:364 | 27.0 | 0.159 | H | -58.3 | -44.6 | 27.0 | 0.159 | 0.0 | ||||||
6zft | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | LEU | B:345 | B:364 | 28.0 | 0.165 | H | -59.5 | -50.7 | 28.0 | 0.165 | 0.0 | ||||||
6zfu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | LEU | B:345 | B:364 | 28.0 | 0.165 | H | -58.0 | -44.6 | 28.0 | 0.165 | 0.0 | ||||||
6xvf | 2 | P23004 | 89.47 | 0.0 |
X-RAY |
2020-07-22 | LEU | B:343 | B:364 | 28.0 | 0.165 | H | -57.8 | -44.7 | 28.0 | 0.165 | 0.0 |
HOH |
9.823 |
CD1 |
O |
||
2bcc | 2 | ? | 87.91 | 0.0 |
X-RAY |
1999-08-02 | LEU | B:347 | B:364 | 27.0 | 0.159 | H | -55.3 | -43.7 | 27.0 | 0.159 | 0.0 | ||||||
3bcc | 2 | P23004 | 87.91 | 0.0 |
X-RAY |
1998-08-19 | LEU | B:347 | B:364 | 28.0 | 0.165 | H | -64.8 | -41.7 | 28.0 | 0.165 | 0.0 | ||||||
6haw | 2 | P23004 | 88.28 | 0.0 |
X-RAY |
2019-01-16 | LEU | B:338 | B:364 | 29.0 | 0.171 | H | -58.9 | -43.8 | 29.0 | 0.171 | 0.0 |
PG4 |
4.473 |
CD1 |
O5 |
||
1bcc | 2 | P23004 | 87.68 | 0.0 |
X-RAY |
1998-08-19 | LEU | B:347 | B:364 | 27.0 | 0.159 | H | -60.7 | -49.8 | 27.0 | 0.159 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p22695-f1 | 1 | P22695 | 100.0 | 0.0 | LEU | A:378 | A:378 | 25.0 | 0.147 | H | -62.4 | -47.8 |