Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 21991888 | . | A | C | CCDS10601.1:NM_003366.2:c.1145tAc>tCc_NP_003357.2:p.382Y>S | Homo sapiens ubiquinol-cytochrome c reductase core protein II (UQCRC2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 10 | P22695 | 100.0 | 0.0 |
EM |
2017-08-30 | TYR | J:348 | K:382 | 39.0 | 0.17 | H | -65.0 | -35.1 | 12.0 | 0.052 | 0.118 |
B:P47985:0.117 |
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TYR | U:348 | W:382 | 39.0 | 0.17 | H | -67.7 | -42.4 | 10.0 | 0.043 | 0.127 |
M:P47985:0.126 |
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5xth | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | TYR | PB:348 | AK:382 | 39.0 | 0.17 | H | -65.0 | -35.1 | 12.0 | 0.052 | 0.118 |
HB:P47985:0.117 |
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TYR | AC:348 | AW:382 | 39.0 | 0.17 | H | -67.7 | -42.3 | 10.0 | 0.043 | 0.127 |
SB:P47985:0.126 |
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5xti | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | TYR | PB:348 | AK:382 | 39.0 | 0.17 | H | -65.0 | -35.2 | 14.0 | 0.061 | 0.109 |
HB:P47985:0.109 |
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TYR | AC:348 | AW:382 | 39.0 | 0.17 | H | -67.7 | -42.4 | 11.0 | 0.048 | 0.122 |
SB:P47985:0.122 |
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1sqb | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2004-09-07 | TYR | B:382 | B:368 | 31.0 | 0.135 | H | -61.3 | -45.7 | 4.0 | 0.017 | 0.118 |
I:P13272:0.117 |
HOH |
6.424 |
O |
O |
|
1sqp | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2005-11-01 | TYR | B:382 | B:368 | 30.0 | 0.13 | H | -61.1 | -46.8 | 5.0 | 0.022 | 0.108 |
I:P13272:0.109 |
HOH |
5.759 |
O |
O |
|
4d6t | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | TYR | B:382 | B:368 | 33.0 | 0.143 | H | -65.3 | -55.8 | 33.0 | 0.143 | 0.0 | ||||||
4d6u | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | TYR | B:382 | B:368 | 37.0 | 0.161 | H | -64.2 | -60.2 | 37.0 | 0.161 | 0.0 | ||||||
5okd | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2018-02-28 | TYR | B:382 | B:368 | 29.0 | 0.126 | H | -67.2 | -48.7 | 29.0 | 0.126 | 0.0 |
HOH |
9.194 |
N |
O |
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6fo6 | 3 | P23004 | 89.4 | 0.0 |
EM |
2018-02-28 | TYR | C:382 | B:368 | 31.0 | 0.135 | H | -69.7 | -55.1 | 31.0 | 0.135 | 0.0 | ||||||
TYR | L:382 | O:368 | 31.0 | 0.135 | H | -69.6 | -55.1 | 31.0 | 0.135 | 0.0 | |||||||||||||
4d6t | 10 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | TYR | L:382 | O:368 | 33.0 | 0.143 | H | -67.8 | -56.1 | NA | NA | NA | ||||||
4d6u | 11 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | TYR | L:382 | O:368 | 36.0 | 0.157 | H | -63.9 | -61.5 | NA | NA | NA | ||||||
6fo0 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | TYR | B:382 | O:368 | 39.0 | 0.17 | H | -63.0 | -50.4 | 39.0 | 0.17 | 0.0 | ||||||
TYR | L:382 | B:368 | 38.0 | 0.165 | H | -62.8 | -50.5 | 38.0 | 0.165 | 0.0 | |||||||||||||
6fo2 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | TYR | B:382 | O:368 | 35.0 | 0.152 | H | -65.4 | -55.0 | 35.0 | 0.152 | 0.0 | ||||||
TYR | L:382 | B:368 | 38.0 | 0.165 | H | -65.5 | -55.0 | 38.0 | 0.165 | 0.0 | |||||||||||||
5gup | 46 | ? | 88.3 | 0.0 |
EM |
2017-03-29 | TYR | VA:382 | v:382 | 41.0 | 0.178 | H | -67.0 | -36.3 | 17.0 | 0.074 | 0.104 |
PB:F1RNZ1:0.104 |
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TYR | GB:382 | 6:382 | 31.0 | 0.135 | H | -65.0 | -35.4 | 12.0 | 0.052 | 0.083 |
OB:F1RNZ1:0.083 |
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1be3 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-13 | TYR | B:368 | B:368 | 28.0 | 0.122 | H | -55.0 | -36.4 | 24.0 | 0.104 | 0.018 |
I:P13272:0.017 |
|||||
1bgy | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-06 | TYR | B:368 | B:368 | 32.0 | 0.139 | H | -49.0 | -40.3 | 27.0 | 0.117 | 0.022 |
I:P13272:0.022 |
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TYR | M:368 | N:368 | 33.0 | 0.143 | H | -47.6 | -34.7 | 29.0 | 0.126 | 0.017 |
T:P13272:0.017 |
||||||||||||
1l0l | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | TYR | B:368 | B:368 | 33.0 | 0.143 | H | -71.1 | -46.1 | 13.0 | 0.057 | 0.086 |
I:P13272:0.087 |
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1l0n | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | TYR | B:368 | B:368 | 33.0 | 0.143 | H | -66.0 | -48.5 | 11.0 | 0.048 | 0.095 |
I:P13272:0.096 |
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1ntk | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | TYR | B:368 | B:368 | 30.0 | 0.13 | H | -59.9 | -49.4 | 8.0 | 0.035 | 0.095 |
I:P13272:0.096 |
HOH |
7.146 |
CE1 |
O |
|
1ntm | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | TYR | B:368 | B:368 | 33.0 | 0.143 | H | -63.0 | -58.8 | 9.0 | 0.039 | 0.104 |
I:P13272:0.104 |
HOH |
3.233 |
OH |
O |
|
1ntz | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | TYR | B:368 | B:368 | 35.0 | 0.152 | H | -67.0 | -46.1 | 13.0 | 0.057 | 0.095 |
I:P13272:0.096 |
HOH |
5.979 |
N |
O |
|
1nu1 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | TYR | B:368 | B:368 | 34.0 | 0.148 | H | -66.8 | -59.0 | 11.0 | 0.048 | 0.1 |
I:P13272:0.1 |
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1pp9 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | TYR | B:368 | B:368 | 33.0 | 0.143 | H | -61.0 | -53.9 | 33.0 | 0.143 | 0.0 |
GOL HOH |
9.961 3.136 |
CE1 CE1 |
O2 O |
||
TYR | L:368 | O:368 | 34.0 | 0.148 | H | -62.5 | -54.8 | 34.0 | 0.148 | 0.0 |
GOL HOH |
9.993 4.147 |
CE1 CE1 |
O2 O |
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1ppj | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | TYR | B:368 | B:368 | 33.0 | 0.143 | H | -64.1 | -48.1 | 33.0 | 0.143 | 0.0 |
HOH |
3.670 |
CE1 |
O |
||
TYR | L:368 | O:368 | 33.0 | 0.143 | H | -61.6 | -46.8 | 33.0 | 0.143 | 0.0 |
HOH |
3.459 |
CE1 |
O |
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1sqq | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-10-25 | TYR | B:368 | B:368 | 36.0 | 0.157 | H | -59.4 | -47.1 | 9.0 | 0.039 | 0.118 |
I:P13272:0.117 |
HOH |
6.423 |
O |
O |
|
1sqv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | TYR | B:368 | B:368 | 29.0 | 0.126 | H | -61.8 | -59.1 | 7.0 | 0.03 | 0.096 |
I:P13272:0.096 |
HOH |
6.635 |
CD1 |
O |
|
1sqx | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | TYR | B:368 | B:368 | 33.0 | 0.143 | H | -64.4 | -41.7 | 8.0 | 0.035 | 0.108 |
G:P13272:0.109 |
HOH |
2.623 |
OH |
O |
|
2a06 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-06-21 | TYR | B:368 | B:368 | 32.0 | 0.139 | H | -66.0 | -43.2 | 32.0 | 0.139 | 0.0 |
PO4 HOH |
6.857 3.507 |
CD1 CD1 |
O2 O |
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TYR | L:368 | O:368 | 32.0 | 0.139 | H | -64.3 | -42.9 | 32.0 | 0.139 | 0.0 |
UNL UNL UNL HOH |
7.799 6.824 7.773 4.136 |
N N CD1 OH |
O2 O1 O1 O |
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2fyu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2006-08-29 | TYR | B:368 | B:368 | 34.0 | 0.148 | H | -71.4 | -49.5 | 3.0 | 0.013 | 0.135 |
I:P13272:0.135 |
HOH |
6.280 |
N |
O |
|
2ybb | 10 | P23004 | 89.29 | 0.0 |
EM |
2011-10-19 | TYR | J:368 | B:368 | 34.0 | 0.148 | H | -61.0 | -53.9 | 34.0 | 0.148 | 0.0 |
HOH |
3.136 |
CE1 |
O |
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TYR | IA:368 | b:368 | 36.0 | 0.157 | H | -62.5 | -54.7 | 36.0 | 0.157 | 0.0 |
HOH |
4.148 |
CE1 |
O |
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5gpn | 2 | P23004 | 89.29 | 0.0 |
EM |
2017-04-05 | TYR | B:368 | B:368 | 69.0 | NA | H | -49.0 | -40.3 | 67.0 | NA | NA |
I:P13272:NA |
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TYR | N:368 | N:368 | 70.0 | NA | H | -47.5 | -34.7 | 70.0 | NA | NA | |||||||||||||
5klv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2016-10-12 | TYR | B:368 | B:368 | 36.0 | 0.157 | H | -63.3 | -47.2 | 36.0 | 0.157 | 0.0 | ||||||
5luf | 2 | P23004 | 89.29 | 0.0 |
EM |
2016-11-30 | TYR | B:368 | m:368 | 33.0 | 0.143 | H | -49.0 | -40.3 | 28.0 | 0.122 | 0.021 |
I:P13272:0.022 |
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TYR | M:368 | n:368 | 34.0 | 0.148 | H | -47.5 | -34.8 | 30.0 | 0.13 | 0.018 |
T:P13272:0.017 |
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6nhg | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2019-06-19 | TYR | B:368 | B:368 | 36.0 | 0.157 | H | -63.7 | -46.6 | 36.0 | 0.157 | 0.0 |
HOH |
7.871 |
OH |
O |
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7o37 | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | TYR | B:368 | B:368 | 31.0 | 0.135 | H | -65.6 | -41.9 | 3.0 | 0.013 | 0.122 |
U:Q9CR68:0.122 |
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TYR | L:368 | M:368 | 39.0 | 0.17 | H | -66.7 | -39.4 | 39.0 | 0.17 | 0.0 | |||||||||||||
7o3c | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | TYR | B:368 | B:368 | 35.0 | 0.152 | H | -69.1 | -39.2 | 13.0 | 0.057 | 0.095 |
U:Q9CR68:0.096 |
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TYR | L:368 | M:368 | 28.0 | 0.122 | H | -65.6 | -45.8 | 28.0 | 0.122 | 0.0 | |||||||||||||
7o3e | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | TYR | B:368 | B:368 | 28.0 | 0.122 | H | -66.6 | -42.1 | 1.0 | 0.004 | 0.118 |
O:Q9CR68:0.117 |
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TYR | I:368 | M:368 | 44.0 | 0.191 | H | -66.9 | -39.0 | 44.0 | 0.191 | 0.0 | |||||||||||||
7o3h | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | TYR | B:368 | B:368 | 30.0 | 0.13 | H | -64.9 | -43.0 | 1.0 | 0.004 | 0.126 |
U:Q9CR68:0.126 |
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TYR | L:368 | M:368 | 32.0 | 0.139 | H | -65.7 | -45.7 | 32.0 | 0.139 | 0.0 | |||||||||||||
6q9e | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | TYR | B:368 | a2:368 | 31.0 | 0.135 | H | -75.6 | -39.5 | 30.0 | 0.13 | 0.005 |
I:None:0.004 |
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TYR | L:368 | a4:368 | 33.0 | 0.143 | H | -70.1 | -42.0 | 4.0 | 0.017 | 0.126 |
S:None:0.126 |
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6qbx | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | TYR | B:368 | a2:368 | 43.0 | 0.187 | H | -68.5 | -33.5 | 43.0 | 0.187 | 0.0 | ||||||
TYR | L:368 | a4:368 | 35.0 | 0.152 | H | -69.7 | -35.0 | 12.0 | 0.052 | 0.1 |
S:None:0.1 |
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6qc2 | 30 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | TYR | DA:368 | a2:368 | 39.0 | 0.17 | H | -73.0 | -36.6 | 30.0 | 0.13 | 0.04 |
KA:None:0.039 |
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TYR | NA:368 | a4:368 | 32.0 | 0.139 | H | -69.8 | -45.1 | 11.0 | 0.048 | 0.091 |
UA:None:0.091 |
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6qc3 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | TYR | B:368 | a2:368 | 40.0 | 0.174 | H | -75.2 | -36.6 | 32.0 | 0.139 | 0.035 |
I:None:0.035 |
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TYR | L:368 | a4:368 | 35.0 | 0.152 | H | -77.5 | -34.6 | 4.0 | 0.017 | 0.135 |
S:None:0.135 |
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6qc4 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | TYR | B:368 | a2:368 | 39.0 | 0.17 | H | -73.2 | -31.8 | 23.0 | 0.1 | 0.07 |
I:None:0.07 |
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TYR | L:368 | a4:368 | 39.0 | 0.17 | H | -72.8 | -32.9 | 9.0 | 0.039 | 0.131 |
S:None:0.13 |
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5j4z | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | TYR | DB:352 | AB:368 | 65.0 | NA | H | -63.7 | -22.5 | 65.0 | NA | NA | ||||||
TYR | OB:352 | AM:368 | 64.0 | NA | H | -63.5 | -22.6 | 64.0 | NA | NA | |||||||||||||
5j7y | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | TYR | DB:352 | AB:368 | 65.0 | NA | H | -63.7 | -22.5 | 65.0 | NA | NA | ||||||
TYR | OB:352 | AM:368 | 64.0 | NA | H | -63.5 | -22.6 | 64.0 | NA | NA | |||||||||||||
5j8k | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | TYR | DB:352 | AB:368 | 64.0 | NA | H | -63.7 | -22.5 | 64.0 | NA | NA | ||||||
TYR | OB:352 | AM:368 | 64.0 | NA | H | -63.6 | -22.7 | 64.0 | NA | NA | |||||||||||||
5nmi | 2 | P23004 | 89.34 | 0.0 |
X-RAY |
2017-06-14 | TYR | B:352 | B:368 | 30.0 | 0.13 | H | -67.0 | -49.6 | 27.0 | 0.117 | 0.013 |
I:P13272:0.013 |
|||||
TYR | M:352 | O:368 | 31.0 | 0.135 | H | -67.0 | -49.6 | 31.0 | 0.135 | 0.0 | |||||||||||||
6zfs | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | TYR | B:349 | B:368 | 28.0 | 0.122 | H | -66.4 | -49.6 | 28.0 | 0.122 | 0.0 | ||||||
6zft | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | TYR | B:349 | B:368 | 34.0 | 0.148 | H | -57.4 | -53.1 | 34.0 | 0.148 | 0.0 | ||||||
6zfu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | TYR | B:349 | B:368 | 29.0 | 0.126 | H | -66.9 | -49.2 | 29.0 | 0.126 | 0.0 |
HOH |
8.350 |
CE1 |
O |
||
6xvf | 2 | P23004 | 89.47 | 0.0 |
X-RAY |
2020-07-22 | TYR | B:347 | B:368 | 28.0 | 0.122 | H | -65.2 | -49.1 | 28.0 | 0.122 | 0.0 |
HOH |
5.962 |
CE1 |
O |
||
2bcc | 2 | ? | 87.91 | 0.0 |
X-RAY |
1999-08-02 | TYR | B:351 | B:368 | 57.0 | 0.248 | H | -70.8 | -67.6 | 57.0 | 0.248 | 0.0 | ||||||
3bcc | 2 | P23004 | 87.91 | 0.0 |
X-RAY |
1998-08-19 | TYR | B:351 | B:368 | 59.0 | 0.257 | H | -62.7 | -75.9 | 59.0 | 0.257 | 0.0 | ||||||
6haw | 2 | P23004 | 88.28 | 0.0 |
X-RAY |
2019-01-16 | TYR | B:342 | B:368 | 33.0 | 0.143 | H | -65.9 | -48.7 | 33.0 | 0.143 | 0.0 |
PG4 |
4.113 |
CD1 |
O5 |
||
1bcc | 2 | P23004 | 87.68 | 0.0 |
X-RAY |
1998-08-19 | TYR | B:351 | B:368 | 65.0 | 0.283 | H | -64.3 | -63.7 | 65.0 | 0.283 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p22695-f1 | 1 | P22695 | 100.0 | 0.0 | TYR | A:382 | A:382 | 34.0 | 0.148 | H | -61.1 | -50.3 |