Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 21991947 | . | G | A | CCDS10601.1:NM_003366.2:c.1204Gtt>Att_NP_003357.2:p.402V>I | Homo sapiens ubiquinol-cytochrome c reductase core protein II (UQCRC2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 10 | P22695 | 100.0 | 0.0 |
EM |
2017-08-30 | VAL | J:368 | K:402 | 82.0 | 0.529 | H | -71.1 | -23.8 | 49.0 | 0.316 | 0.213 |
B:P47985:0.213 |
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VAL | U:368 | W:402 | 99.0 | 0.639 | H | -66.0 | -27.5 | 76.0 | 0.49 | 0.149 |
M:P47985:0.148 |
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5xth | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | VAL | PB:368 | AK:402 | 81.0 | 0.523 | H | -71.1 | -23.8 | 49.0 | 0.316 | 0.207 |
HB:P47985:0.206 |
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VAL | AC:368 | AW:402 | 99.0 | 0.639 | H | -66.0 | -27.5 | 77.0 | 0.497 | 0.142 |
SB:P47985:0.142 |
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5xti | 67 | P22695 | 100.0 | 0.0 |
EM |
2017-09-13 | VAL | PB:368 | AK:402 | 83.0 | 0.535 | H | -71.1 | -23.9 | 50.0 | 0.323 | 0.212 |
HB:P47985:0.213 |
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VAL | AC:368 | AW:402 | 98.0 | 0.632 | H | -66.1 | -27.4 | 75.0 | 0.484 | 0.148 |
SB:P47985:0.148 |
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1sqb | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2004-09-07 | ALA | B:402 | B:388 | 66.0 | 0.574 | H | -80.7 | -38.0 | 52.0 | 0.452 | 0.122 |
I:P13272:0.122 |
HOH |
4.861 |
O |
O |
|
1sqp | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2005-11-01 | ALA | B:402 | B:388 | 68.0 | 0.591 | H | -73.3 | -36.1 | 52.0 | 0.452 | 0.139 |
I:P13272:0.139 |
HOH |
4.540 |
N |
O |
|
4d6t | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | ALA | B:402 | B:388 | 49.0 | 0.426 | H | -47.5 | -46.5 | 49.0 | 0.426 | 0.0 | ||||||
4d6u | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2015-01-14 | ALA | B:402 | B:388 | 42.0 | 0.365 | H | -65.2 | -39.8 | 42.0 | 0.365 | 0.0 | ||||||
5okd | 2 | P23004 | 89.4 | 0.0 |
X-RAY |
2018-02-28 | ALA | B:402 | B:388 | 66.0 | 0.574 | H | -75.5 | -16.6 | 66.0 | 0.574 | 0.0 | ||||||
6fo6 | 3 | P23004 | 89.4 | 0.0 |
EM |
2018-02-28 | ALA | C:402 | B:388 | 67.0 | 0.583 | H | -92.2 | -3.4 | 67.0 | 0.583 | 0.0 | ||||||
ALA | L:402 | O:388 | 66.0 | 0.574 | H | -92.2 | -3.4 | 66.0 | 0.574 | 0.0 | |||||||||||||
4d6t | 10 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | ALA | L:402 | O:388 | 49.0 | 0.426 | H | -46.1 | -47.9 | NA | NA | NA | ||||||
4d6u | 11 | P23004 | 89.18 | 0.0 |
X-RAY |
2015-01-14 | ALA | L:402 | O:388 | 43.0 | 0.374 | H | -64.6 | -39.1 | NA | NA | NA | ||||||
6fo0 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | ALA | B:402 | O:388 | 45.0 | 0.391 | H | -69.5 | -59.4 | 45.0 | 0.391 | 0.0 | ||||||
ALA | L:402 | B:388 | 49.0 | 0.426 | H | -69.6 | -59.4 | 49.0 | 0.426 | 0.0 | |||||||||||||
6fo2 | 2 | P23004 | 89.18 | 0.0 |
EM |
2018-02-28 | ALA | B:402 | O:388 | 51.0 | 0.443 | H | -61.1 | -55.6 | 51.0 | 0.443 | 0.0 | ||||||
ALA | L:402 | B:388 | 48.0 | 0.417 | H | -61.0 | -55.6 | 48.0 | 0.417 | 0.0 | |||||||||||||
5gup | 46 | ? | 88.3 | 0.0 |
EM |
2017-03-29 | VAL | VA:402 | v:402 | 83.0 | 0.535 | T | -114.6 | -64.6 | 67.0 | 0.432 | 0.103 |
PB:F1RNZ1:0.103 |
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VAL | GB:402 | 6:402 | 76.0 | 0.49 | H | -100.5 | -69.4 | 59.0 | 0.381 | 0.109 |
OB:F1RNZ1:0.11 |
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1be3 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-13 | ALA | B:388 | B:388 | 74.0 | 0.643 | H | -97.4 | -56.6 | 69.0 | 0.6 | 0.043 |
I:P13272:0.043 |
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1bgy | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
1999-01-06 | ALA | B:388 | B:388 | 71.0 | 0.617 | H | -81.3 | -72.9 | 67.0 | 0.583 | 0.034 |
I:P13272:0.035 |
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ALA | M:388 | N:388 | 75.0 | 0.652 | H | -79.8 | -73.1 | 70.0 | 0.609 | 0.043 |
T:P13272:0.043 |
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1l0l | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | ALA | B:388 | B:388 | 63.0 | 0.548 | H | -65.8 | -48.4 | 51.0 | 0.443 | 0.105 |
I:P13272:0.104 |
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1l0n | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-04-08 | ALA | B:388 | B:388 | 69.0 | 0.6 | H | -64.0 | -43.1 | 57.0 | 0.496 | 0.104 |
I:P13272:0.104 |
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1ntk | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ALA | B:388 | B:388 | 63.0 | 0.548 | H | -80.4 | -41.5 | 49.0 | 0.426 | 0.122 |
I:P13272:0.122 |
HOH |
4.032 |
CB |
O |
|
1ntm | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ALA | B:388 | B:388 | 70.0 | 0.609 | H | -93.8 | -30.5 | 57.0 | 0.496 | 0.113 |
I:P13272:0.113 |
HOH |
4.012 |
N |
O |
|
1ntz | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ALA | B:388 | B:388 | 68.0 | 0.591 | H | -66.3 | -48.6 | 56.0 | 0.487 | 0.104 |
I:P13272:0.104 |
HOH |
3.639 |
N |
O |
|
1nu1 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2003-10-07 | ALA | B:388 | B:388 | 68.0 | 0.591 | H | -91.6 | -29.6 | 54.0 | 0.47 | 0.121 |
I:P13272:0.122 |
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1pp9 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | ALA | B:388 | B:388 | 67.0 | 0.583 | H | -78.2 | -29.4 | 67.0 | 0.583 | 0.0 |
GOL HOH |
4.874 3.467 |
CB N |
O1 O |
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ALA | L:388 | O:388 | 68.0 | 0.591 | H | -78.7 | -31.3 | 68.0 | 0.591 | 0.0 |
GOL HOH |
5.254 3.509 |
CB CB |
O1 O |
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1ppj | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2004-07-20 | ALA | B:388 | B:388 | 66.0 | 0.574 | H | -76.9 | -50.4 | 66.0 | 0.574 | 0.0 |
GOL HOH |
5.919 3.633 |
CB CB |
O2 O |
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ALA | L:388 | O:388 | 70.0 | 0.609 | H | -79.1 | -49.2 | 70.0 | 0.609 | 0.0 |
AZI GOL HOH |
8.618 6.227 3.428 |
CB CB CB |
N3 O2 O |
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1sqq | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-10-25 | ALA | B:388 | B:388 | 66.0 | 0.574 | H | -68.1 | -27.5 | 46.0 | 0.4 | 0.174 |
I:P13272:0.174 |
HOH |
3.528 |
CA |
O |
|
1sqv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | ALA | B:388 | B:388 | 70.0 | 0.609 | H | -89.0 | -24.6 | 57.0 | 0.496 | 0.113 |
I:P13272:0.113 |
HOH |
4.283 |
CA |
O |
|
1sqx | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-09-06 | ALA | B:388 | B:388 | 67.0 | 0.583 | H | -70.4 | -49.9 | 54.0 | 0.47 | 0.113 |
G:P13272:0.113 |
HOH |
3.953 |
N |
O |
|
2a06 | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2005-06-21 | ALA | B:388 | B:388 | 61.0 | 0.53 | H | -76.1 | -45.2 | 61.0 | 0.53 | 0.0 |
HOH |
3.449 |
CB |
O |
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ALA | L:388 | O:388 | 64.0 | 0.557 | H | -77.6 | -43.6 | 64.0 | 0.557 | 0.0 |
GOL HOH |
5.643 3.288 |
CB CB |
O1 O |
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2fyu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2006-08-29 | ALA | B:388 | B:388 | 67.0 | 0.583 | H | -77.0 | -44.7 | 55.0 | 0.478 | 0.105 |
I:P13272:0.104 |
HOH |
3.720 |
CB |
O |
|
2ybb | 10 | P23004 | 89.29 | 0.0 |
EM |
2011-10-19 | ALA | J:388 | B:388 | 66.0 | 0.574 | H | -78.2 | -29.4 | 66.0 | 0.574 | 0.0 |
HOH |
3.468 |
N |
O |
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ALA | IA:388 | b:388 | 69.0 | 0.6 | H | -78.7 | -31.3 | 69.0 | 0.6 | 0.0 |
HOH |
3.508 |
CB |
O |
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5gpn | 2 | P23004 | 89.29 | 0.0 |
EM |
2017-04-05 | ALA | B:388 | B:388 | 85.0 | 0.739 | H | -81.4 | -72.9 | 85.0 | 0.739 | 0.0 | ||||||
ALA | N:388 | N:388 | 88.0 | 0.765 | H | -79.8 | -73.1 | 88.0 | 0.765 | 0.0 | |||||||||||||
5klv | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2016-10-12 | ALA | B:388 | B:388 | 61.0 | 0.53 | H | -73.8 | -41.3 | 61.0 | 0.53 | 0.0 |
HOH |
3.519 |
HA |
O |
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5luf | 2 | P23004 | 89.29 | 0.0 |
EM |
2016-11-30 | ALA | B:388 | m:388 | 73.0 | 0.635 | H | -81.3 | -72.9 | 68.0 | 0.591 | 0.044 |
I:P13272:0.043 |
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ALA | M:388 | n:388 | 77.0 | 0.67 | H | -79.8 | -73.1 | 72.0 | 0.626 | 0.044 |
T:P13272:0.043 |
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6nhg | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2019-06-19 | ALA | B:388 | B:388 | 67.0 | 0.583 | H | -68.2 | -47.2 | 67.0 | 0.583 | 0.0 |
HOH |
6.011 |
HB3 |
O |
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7o37 | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | ALA | B:388 | B:388 | 87.0 | 0.757 | H | -77.1 | -37.8 | 71.0 | 0.617 | 0.14 |
U:Q9CR68:0.139 |
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ALA | L:388 | M:388 | 70.0 | 0.609 | H | -75.2 | -43.3 | 70.0 | 0.609 | 0.0 | |||||||||||||
7o3c | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | ALA | B:388 | B:388 | 89.0 | 0.774 | H | -80.7 | -61.6 | 67.0 | 0.583 | 0.191 |
U:Q9CR68:0.191 |
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ALA | L:388 | M:388 | 70.0 | 0.609 | H | -80.8 | -61.8 | 70.0 | 0.609 | 0.0 | |||||||||||||
7o3e | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | ALA | B:388 | B:388 | 79.0 | 0.687 | H | -74.6 | -41.0 | 67.0 | 0.583 | 0.104 |
O:Q9CR68:0.104 |
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ALA | I:388 | M:388 | 65.0 | 0.565 | H | -76.9 | -61.6 | 65.0 | 0.565 | 0.0 | |||||||||||||
7o3h | 2 | Q9DB77 | 85.42 | 0.0 |
EM |
2021-10-13 | ALA | B:388 | B:388 | 78.0 | 0.678 | H | -74.9 | -42.2 | 62.0 | 0.539 | 0.139 |
U:Q9CR68:0.139 |
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ALA | L:388 | M:388 | 69.0 | 0.6 | H | -75.5 | -43.2 | 69.0 | 0.6 | 0.0 | |||||||||||||
6q9e | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ALA | B:388 | a2:388 | 61.0 | 0.53 | H | -70.3 | -60.7 | 61.0 | 0.53 | 0.0 | ||||||
ALA | L:388 | a4:388 | 72.0 | 0.626 | H | -66.7 | -58.8 | 64.0 | 0.557 | 0.069 |
S:None:0.07 |
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6qbx | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ALA | B:388 | a2:388 | 55.0 | 0.478 | H | -82.0 | -60.0 | 55.0 | 0.478 | 0.0 | ||||||
ALA | L:388 | a4:388 | 69.0 | 0.6 | H | -81.6 | -14.6 | 62.0 | 0.539 | 0.061 |
S:None:0.061 |
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6qc2 | 30 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ALA | DA:388 | a2:388 | 39.0 | 0.339 | S | -63.4 | -56.2 | 39.0 | 0.339 | 0.0 | ||||||
ALA | NA:388 | a4:388 | 58.0 | 0.504 | H | -72.3 | -39.7 | 53.0 | 0.461 | 0.043 |
UA:None:0.043 |
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6qc3 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ALA | B:388 | a2:388 | 50.0 | 0.435 | H | -80.8 | -53.3 | 50.0 | 0.435 | 0.0 | ||||||
ALA | L:388 | a4:388 | 65.0 | 0.565 | H | -72.9 | -25.8 | 63.0 | 0.548 | 0.017 |
S:None:0.017 |
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6qc4 | 2 | W5Q0F9 | 89.29 | 0.0 |
EM |
2019-08-21 | ALA | B:388 | a2:388 | 55.0 | 0.478 | H | -72.9 | -61.5 | 55.0 | 0.478 | 0.0 | ||||||
ALA | L:388 | a4:388 | 52.0 | 0.452 | H | -83.4 | -51.2 | 42.0 | 0.365 | 0.087 |
S:None:0.087 |
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5j4z | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ALA | DB:372 | AB:388 | 73.0 | 0.635 | T | -95.2 | 15.6 | 10.0 | 0.087 | 0.548 |
KB:W5P2X9:0.548 |
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ALA | OB:372 | AM:388 | 74.0 | 0.643 | T | -95.3 | 15.8 | 11.0 | 0.096 | 0.547 |
VB:W5P2X9:0.548 |
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5j7y | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ALA | DB:372 | AB:388 | 73.0 | 0.635 | T | -95.2 | 15.6 | 11.0 | 0.096 | 0.539 |
KB:W5P2X9:0.539 |
|||||
ALA | OB:372 | AM:388 | 73.0 | 0.635 | T | -95.3 | 15.8 | 11.0 | 0.096 | 0.539 |
VB:W5P2X9:0.539 |
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5j8k | 52 | W5Q0F9 | 89.34 | 0.0 |
EM |
2016-09-21 | ALA | DB:372 | AB:388 | 73.0 | 0.635 | T | -95.2 | 15.6 | 10.0 | 0.087 | 0.548 |
KB:W5P2X9:0.548 |
|||||
ALA | OB:372 | AM:388 | 74.0 | 0.643 | T | -95.3 | 15.8 | 11.0 | 0.096 | 0.547 |
VB:W5P2X9:0.548 |
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5nmi | 2 | P23004 | 89.34 | 0.0 |
X-RAY |
2017-06-14 | ALA | B:372 | B:388 | 55.0 | 0.478 | H | -52.5 | -53.5 | 55.0 | 0.478 | 0.0 | ||||||
ALA | M:372 | O:388 | 53.0 | 0.461 | H | -52.6 | -53.4 | 53.0 | 0.461 | 0.0 | |||||||||||||
6zfs | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ALA | B:369 | B:388 | 60.0 | 0.522 | H | -76.7 | -18.3 | 60.0 | 0.522 | 0.0 | ||||||
6zft | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ALA | B:369 | B:388 | 73.0 | 0.635 | H | -79.2 | -27.0 | 73.0 | 0.635 | 0.0 | ||||||
6zfu | 2 | P23004 | 89.29 | 0.0 |
X-RAY |
2021-06-30 | ALA | B:369 | B:388 | 68.0 | 0.591 | H | -76.4 | -18.3 | 68.0 | 0.591 | 0.0 |
HOH |
8.211 |
CB |
O |
||
6xvf | 2 | P23004 | 89.47 | 0.0 |
X-RAY |
2020-07-22 | ALA | B:367 | B:388 | 59.0 | 0.513 | H | -73.0 | -22.7 | 59.0 | 0.513 | 0.0 |
HOH |
6.422 |
CB |
O |
||
2bcc | 2 | ? | 87.91 | 0.0 |
X-RAY |
1999-08-02 | ALA | B:371 | B:388 | 69.0 | 0.6 | H | -60.2 | -48.6 | 69.0 | 0.6 | 0.0 | ||||||
3bcc | 2 | P23004 | 87.91 | 0.0 |
X-RAY |
1998-08-19 | ALA | B:371 | B:388 | 73.0 | 0.635 | H | -65.8 | -36.9 | 73.0 | 0.635 | 0.0 | ||||||
6haw | 2 | P23004 | 88.28 | 0.0 |
X-RAY |
2019-01-16 | ALA | B:362 | B:388 | 75.0 | 0.652 | H | -74.7 | -27.7 | 75.0 | 0.652 | 0.0 |
PG4 |
5.215 |
CB |
C3 |
||
1bcc | 2 | P23004 | 87.68 | 0.0 |
X-RAY |
1998-08-19 | ALA | B:371 | B:388 | 70.0 | 0.609 | H | -69.9 | -67.6 | 70.0 | 0.609 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p22695-f1 | 1 | P22695 | 100.0 | 0.0 | VAL | A:402 | A:402 | 90.0 | 0.581 | H | -88.4 | -48.4 |