Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 29473064 . A C CCDS32427.1:NM_001017390.2:c.254aAt>aCt_NP_001017390.1:p.85N>T Homo sapiens sulfotransferase family 1A member 4 (SULT1A4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1cjm 1 P50224 100.0 0.0 X-RAY
 1999-11-10 ASN A:85 A:85 69.0 NA -150.7 107.5 69.0 NA NA HOH
 8.945
 N
 O
2a3r 1 P50224 100.0 0.0 X-RAY
 2005-08-30 ASN A:85 A:85 47.0 0.294 -148.5 53.1 47.0 0.294 0.0 LDP
HOH
 6.837
2.803
 N
N
 N1
O
ASN B:85 B:85 47.0 0.294 -149.5 55.0 NA NA NA
4gra 1 P50225 93.22 0.0 X-RAY
 2013-01-16 LYS A:89 A:85 71.0 0.355 -164.6 144.9 71.0 0.355 0.0 HOH
 7.222
 N
 O
LYS B:89 B:85 16.0 NA -158.9 158.0 NA NA NA
1z28 1 P50225 92.88 0.0 X-RAY
 2006-05-30 LYS A:85 A:85 57.0 0.285 -163.4 148.9 57.0 0.285 0.0 HOH
 2.926
 CG
 O
1ls6 1 P50225 92.88 0.0 X-RAY
 2003-08-05 LYS A:85 A:85 70.0 0.35 -168.4 140.7 70.0 0.35 0.0 NPO
NPO
HOH
 7.045
6.857
4.804
 O
N
N
 O2
C6
O
2d06 1 P50225 92.88 0.0 X-RAY
 2005-10-25 LYS A:85 A:85 20.0 NA -163.6 136.9 20.0 NA NA EST
HOH
 5.995
4.876
 O
N
 C17
O
LYS B:85 B:85 70.0 0.35 -174.8 149.5 NA NA NA
3u3k 1 P50225 92.88 0.0 X-RAY
 2011-11-16 LYS A:105 A:85 63.0 0.315 -162.0 136.0 63.0 0.315 0.0 03V
HOH
 6.732
3.509
 O
CA
 C9
O
LYS B:105 B:85 71.0 0.355 -157.2 140.9 NA NA NA
3u3m 1 P50225 92.88 0.0 X-RAY
 2011-11-16 LYS A:105 A:85 74.0 0.37 -164.8 149.0 74.0 0.37 0.0 3QV
HOH
 6.880
4.845
 O
N
 N1
O
3u3o 1 P50225 92.88 0.0 X-RAY
 2011-11-16 LYS A:105 A:85 72.0 0.36 -159.8 142.7 72.0 0.36 0.0 3QV
3QV
HOH
 6.012
6.683
2.960
 O
N
NZ
 N1
O1
O
3u3j 1 P50225 92.86 0.0 X-RAY
 2011-11-16 LYS A:105 A:85 73.0 0.365 -169.7 127.1 73.0 0.365 0.0
LYS B:105 B:85 56.0 0.28 -158.7 144.0 NA NA NA
3u3r 1 P50225 92.54 0.0 X-RAY
 2011-11-16 LYS A:105 A:85 70.0 0.35 -167.8 143.6 70.0 0.35 0.0 NPO
NPO
HOH
 6.973
6.919
3.769
 O
N
CG
 O3
C6
O
3qvu 1 P50225 91.53 0.0 X-RAY
 2011-08-31 LYS A:85 A:85 69.0 0.345 -168.1 136.4 69.0 0.345 0.0 NPO
HOH
 6.569
5.136
 O
N
 O3
O
LYS B:85 B:85 72.0 0.36 -173.4 142.5 NA NA NA
3qvv 1 P50225 91.53 0.0 X-RAY
 2011-08-31 LYS A:85 A:85 70.0 0.35 -166.1 138.2 70.0 0.35 0.0 3QV
HOH
 6.005
5.038
 O
N
 N1
O
LYS B:85 B:85 73.0 0.365 -169.5 148.3 NA NA NA
1z29 1 P50226 90.85 0.0 X-RAY
 2006-05-30 LYS A:85 A:85 72.0 0.36 -175.7 128.4 72.0 0.36 0.0 ACY
HOH
 8.226
3.041
 N
NZ
 OXT
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p0dmm9-f1 1 P0DMM9 100.0 0.0 ASN A:85 A:85 51.0 0.319 -157.0 46.3
af-p0dmn0-f1 1 P0DMN0 100.0 0.0 ASN A:85 A:85 51.0 0.319 -156.9 45.4
af-p50225-f1 1 P50225 92.88 0.0 LYS A:85 A:85 75.0 0.375 -152.2 139.7
af-p50226-f1 1 P50226 90.17 0.0 LYS A:85 A:85 71.0 0.355 -153.4 135.9