Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 29475788 . G A CCDS32427.1:NM_001017390.2:c.780atG>atA_NP_001017390.1:p.260M>I Homo sapiens sulfotransferase family 1A member 4 (SULT1A4), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1cjm 1 P50224 100.0 0.0 X-RAY
 1999-11-10 MET A:260 NA:NA DO NA DO DO DO NA NA NA
2a3r 1 P50224 100.0 0.0 X-RAY
 2005-08-30 MET A:260 A:260 91.0 0.492 -117.1 145.0 91.0 0.492 0.0 A3P
HOH
 4.477
3.111
 N
O
 O3P
O
MET B:260 B:260 93.0 0.503 -126.7 140.9 NA NA NA
4gra 1 P50225 93.22 0.0 X-RAY
 2013-01-16 MET A:264 A:260 92.0 0.497 -111.3 151.8 92.0 0.497 0.0 A3P
HOH
 4.717
2.554
 N
N
 O1P
O
MET B:264 B:260 89.0 0.481 -109.7 158.7 NA NA NA
1z28 1 P50225 92.88 0.0 X-RAY
 2006-05-30 MET A:260 A:260 93.0 0.503 -115.2 159.4 93.0 0.503 0.0 A3P
HOH
 4.606
2.758
 O
O
 O1P
O
1ls6 1 P50225 92.88 0.0 X-RAY
 2003-08-05 MET A:260 A:260 107.0 0.578 -121.9 156.0 107.0 0.578 0.0 A3P
HOH
 4.765
3.106
 O
SD
 O3P
O
2d06 1 P50225 92.88 0.0 X-RAY
 2005-10-25 MET A:260 A:260 90.0 0.486 -128.3 145.9 90.0 0.486 0.0 A3P
HOH
 4.585
2.734
 N
O
 O2P
O
MET B:260 B:260 101.0 0.546 -131.4 155.0 NA NA NA
3u3k 1 P50225 92.88 0.0 X-RAY
 2011-11-16 MET A:280 A:260 86.0 0.465 -104.8 151.1 86.0 0.465 0.0 A3P
HOH
 4.505
2.821
 O
N
 O2P
O
MET B:280 B:260 86.0 0.465 -114.7 161.2 NA NA NA
3u3m 1 P50225 92.88 0.0 X-RAY
 2011-11-16 MET A:280 A:260 86.0 0.465 -104.9 153.0 86.0 0.465 0.0 A3P
HOH
 4.519
2.855
 O
N
 O3P
O
3u3o 1 P50225 92.88 0.0 X-RAY
 2011-11-16 MET A:280 A:260 83.0 0.449 -104.6 146.5 83.0 0.449 0.0 A3P
HOH
 4.683
2.246
 O
O
 O3P
O
3u3j 1 P50225 92.86 0.0 X-RAY
 2011-11-16 MET A:280 A:260 111.0 0.6 -121.1 155.8 111.0 0.6 0.0 A3P
HOH
 4.891
4.110
 O
O
 O2P
O
MET B:280 B:260 92.0 0.497 -124.5 160.5 NA NA NA
3u3r 1 P50225 92.54 0.0 X-RAY
 2011-11-16 MET A:280 A:260 88.0 0.476 -109.6 149.7 88.0 0.476 0.0 A3P
HOH
 4.532
2.380
 O
O
 O2P
O
3qvu 1 P50225 91.53 0.0 X-RAY
 2011-08-31 MET A:260 A:260 82.0 0.443 -112.3 151.0 82.0 0.443 0.0 A3P
HOH
 4.453
3.094
 O
O
 O3P
O
MET B:260 B:260 95.0 0.514 -119.0 153.5 NA NA NA
3qvv 1 P50225 91.53 0.0 X-RAY
 2011-08-31 MET A:260 A:260 85.0 0.459 -114.5 157.1 85.0 0.459 0.0 A3P
HOH
 4.636
9.715
 N
N
 O3P
O
MET B:260 B:260 88.0 0.476 -128.0 165.6 NA NA NA
1z29 1 P50226 90.85 0.0 X-RAY
 2006-05-30 MET A:260 A:260 90.0 0.486 -114.3 162.3 90.0 0.486 0.0 A3P
HOH
 4.671
3.528
 O
O
 O3P
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p0dmm9-f1 1 P0DMM9 100.0 0.0 MET A:260 A:260 101.0 0.546 -122.3 153.7
af-p0dmn0-f1 1 P0DMN0 100.0 0.0 MET A:260 A:260 101.0 0.546 -121.3 153.6
af-p50225-f1 1 P50225 92.88 0.0 MET A:260 A:260 93.0 0.503 -127.5 154.6
af-p50226-f1 1 P50226 90.17 0.0 MET A:260 A:260 102.0 0.551 -120.5 150.9