Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 30495176 . G A CCDS32433.1:NM_002209.2:c.751Gcc>Acc_NP_002200.2:p.251A>T Homo sapiens integrin subunit alpha L (ITGAL), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5e6r 1 P20701 99.6 0.0 X-RAY
 2016-03-02 ALA A:226 A:226 11.0 0.096 -86.8 120.2 11.0 0.096 0.0 HOH
 3.333
 CA
 O
5e6s 1 P20701 99.6 0.0 X-RAY
 2016-03-02 ALA A:226 A:226 13.0 0.113 -85.0 141.8 13.0 0.113 0.0 HOH
 3.320
 CB
 O
ALA C:226 C:226 10.0 0.087 -71.7 143.2 NA NA NA
ALA E:226 E:226 10.0 0.087 -69.4 148.1 NA NA NA
5e6u 1 P20701 99.6 0.0 X-RAY
 2016-04-06 ALA A:226 A:226 9.0 0.078 -83.0 133.1 9.0 0.078 0.0 HOH
 3.471
 CB
 O
7kc3 1 P20701 98.98 1e-132 X-RAY
 2021-10-06 ALA A:106 C:226 12.0 0.104 -67.1 141.4 12.0 0.104 0.0 HOH
 2.735
 HB1
 O
1rd4 1 P20701 98.43 4e-128 X-RAY
 2004-03-30 ALA A:106 A:226 12.0 0.104 -73.0 140.1 12.0 0.104 0.0
ALA B:106 B:226 12.0 0.104 -73.4 140.6 NA NA NA
ALA C:106 C:226 12.0 0.104 -70.7 140.8 NA NA NA
ALA D:106 D:226 8.0 0.07 -71.6 139.8 NA NA NA
1lfa 1 P20701 100.0 7e-128 X-RAY
 1996-01-29 ALA A:102 A:226 12.0 0.104 -68.9 138.4 12.0 0.104 0.0 HOH
 1.865
 O
 H2
ALA B:102 B:226 12.0 0.104 -74.3 135.3 12.0 0.104 0.0 HOH
 2.455
 O
 H1
1zon 1 P20701 100.0 7e-128 X-RAY
 1996-12-07 ALA A:102 A:226 11.0 0.096 -71.7 137.6 11.0 0.096 0.0 HOH
 3.824
 CB
 H1
1zoo 1 P20701 100.0 7e-128 X-RAY
 1996-12-07 ALA A:102 A:226 10.0 0.087 -68.1 134.2 10.0 0.087 0.0
ALA B:102 B:226 9.0 0.078 -64.3 138.0 9.0 0.078 0.0
1zop 1 P20701 100.0 7e-128 X-RAY
 1996-12-07 ALA A:102 A:226 10.0 0.087 -68.1 134.2 10.0 0.087 0.0 HOH
 1.940
 O
 H1
ALA B:102 B:226 9.0 0.078 -64.3 138.0 9.0 0.078 0.0 HOH
 2.255
 O
 H1
1dgq 1 P20701 99.46 1e-124 NMR
 2000-02-03 ALA A:103 A:226 2.0 0.017 -79.6 98.8 2.0 0.017 0.0
1xdd 1 P20701 99.46 1e-124 X-RAY
 2004-09-21 ALA A:103 A:226 12.0 0.104 -67.1 140.2 12.0 0.104 0.0 HOH
 2.774
 O
 O
ALA B:103 B:226 13.0 0.113 -60.1 143.9 NA NA NA
1xdg 1 P20701 99.46 1e-124 X-RAY
 2004-09-21 ALA A:103 A:226 12.0 0.104 -65.5 139.9 12.0 0.104 0.0 HOH
 2.774
 O
 O
ALA B:103 B:226 13.0 0.113 -63.1 144.6 NA NA NA
1xuo 1 P20701 99.46 1e-124 X-RAY
 2005-10-26 ALA A:103 A:226 13.0 0.113 -66.8 140.4 13.0 0.113 0.0 HOH
 2.857
 O
 O
ALA B:103 B:226 14.0 0.122 -65.8 148.0 NA NA NA
4ixd 1 P20701 99.46 1e-124 X-RAY
 2014-01-29 ALA A:103 A:226 12.0 0.104 -64.4 141.7 12.0 0.104 0.0 HOH
 2.756
 O
 O
7kc5 1 P20701 100.0 3e-123 X-RAY
 2021-10-06 ALA A:101 A:226 11.0 0.096 -66.3 151.4 11.0 0.096 0.0 HOH
 2.767
 HB1
 O
ALA B:101 C:226 8.0 0.07 -66.2 150.8 NA NA NA
7kc6 1 P20701 100.0 3e-123 X-RAY
 2021-10-06 ALA A:101 C:226 12.0 0.104 -64.3 139.0 12.0 0.104 0.0 HOH
 2.551
 HB1
 O
ALA B:101 A:226 12.0 0.104 -61.3 142.0 NA NA NA
3e2m 1 P20701 99.45 6e-123 X-RAY
 2008-08-19 ALA A:102 A:226 11.0 0.096 -72.1 137.9 11.0 0.096 0.0 HOH
 2.719
 O
 O
ALA B:102 B:226 13.0 0.113 -69.7 148.3 13.0 0.113 0.0 HOH
 3.671
 CB
 O
3eoa 3 P20701 100.0 8e-123 X-RAY
 2009-04-14 ALA E:99 I:226 13.0 0.113 -83.6 141.8 13.0 0.113 0.0 HOH
 4.024
 CB
 O
ALA F:99 J:226 11.0 0.096 -67.2 138.5 NA NA NA
3eob 3 P20701 100.0 8e-123 X-RAY
 2009-04-14 ALA C:99 I:226 16.0 0.139 -97.8 146.4 16.0 0.139 0.0
ALA F:99 J:226 14.0 0.122 -91.7 123.3 NA NA NA
1cqp 1 P20701 99.45 2e-122 X-RAY
 2000-08-07 ALA A:99 A:226 11.0 0.096 -74.9 130.6 11.0 0.096 0.0 HOH
 3.555
 CB
 O
ALA B:99 B:226 11.0 0.096 -67.8 137.7 NA NA NA
3bqm 1 P20701 99.45 2e-122 X-RAY
 2008-08-19 ALA A:99 B:226 12.0 0.104 -64.5 140.2 12.0 0.104 0.0 HOH
 2.692
 O
 O
ALA B:99 C:226 13.0 0.113 -70.9 144.4 NA NA NA
3bqn 1 P20701 99.45 2e-122 X-RAY
 2008-08-19 ALA A:99 B:226 13.0 0.113 -62.6 139.2 13.0 0.113 0.0 HOH
 2.706
 CB
 O
ALA B:99 C:226 15.0 0.13 -66.2 144.2 NA NA NA
2ica 1 P20701 100.0 3e-121 X-RAY
 2006-12-19 ALA A:102 A:226 13.0 0.113 -64.1 145.4 13.0 0.113 0.0 HOH
 3.381
 CB
 O
2o7n 1 P20701 100.0 3e-121 X-RAY
 2007-03-20 ALA A:102 A:226 11.0 0.096 -64.7 144.2 11.0 0.096 0.0 HOH
 2.634
 O
 O
3m6f 1 P20701 100.0 3e-121 X-RAY
 2010-05-12 ALA A:102 A:226 13.0 0.113 -63.6 148.8 13.0 0.113 0.0 HOH
 3.742
 CB
 O
3f74 1 P20701 99.44 5e-121 X-RAY
 2009-06-23 ALA A:100 A:226 11.0 0.096 -65.0 142.8 11.0 0.096 0.0 HOH
 2.575
 O
 O
ALA B:100 B:226 12.0 0.104 -63.2 143.5 NA NA NA
ALA C:100 C:226 11.0 0.096 -68.1 147.6 NA NA NA
3f78 1 P20701 99.44 5e-121 X-RAY
 2009-06-23 ALA A:100 A:226 10.0 0.087 -63.9 141.5 10.0 0.087 0.0 HOH
 2.730
 O
 O
ALA B:100 B:226 11.0 0.096 -65.6 146.3 NA NA NA
ALA C:100 C:226 12.0 0.104 -62.8 145.6 NA NA NA
3hi6 1 P20701 98.33 3e-119 X-RAY
 2009-09-22 ALA A:99 A:226 7.0 0.061 -55.9 137.7 NA NA NA
ALA B:99 B:226 13.0 0.113 -69.8 150.8 13.0 0.113 0.0 HOH
 2.805
 O
 O
1mjn 1 P20701 98.88 3e-119 X-RAY
 2003-01-28 ALA A:99 A:226 12.0 0.104 -66.7 148.3 12.0 0.104 0.0 HOH
 2.628
 O
 O
1mq9 1 P20701 98.88 6e-119 X-RAY
 2003-01-14 ALA A:100 A:226 10.0 0.087 -68.1 137.1 10.0 0.087 0.0 HOH
 3.647
 CA
 O
1mqa 1 P20701 98.88 6e-119 X-RAY
 2003-01-14 ALA A:100 A:226 11.0 0.096 -65.1 160.7 11.0 0.096 0.0 HOH
 3.501
 CB
 O
3tcx 2 P20701 98.88 7e-119 X-RAY
 2011-08-31 ALA B:99 B:226 10.0 0.087 -70.2 134.2 10.0 0.087 0.0
ALA D:99 D:226 9.0 0.078 -70.8 136.7 NA NA NA
ALA F:99 F:226 9.0 0.078 -72.0 135.7 NA NA NA
ALA H:99 H:226 9.0 0.078 -70.9 136.0 NA NA NA
ALA J:99 J:226 9.0 0.078 -72.4 135.4 NA NA NA
ALA L:99 L:226 10.0 0.087 -72.4 135.5 NA NA NA
ALA N:99 N:226 9.0 0.078 -71.8 135.4 NA NA NA
ALA P:99 P:226 10.0 0.087 -70.4 134.9 NA NA NA
ALA R:99 R:226 10.0 0.087 -72.3 135.6 NA NA NA
ALA T:99 T:226 9.0 0.078 -73.1 136.1 NA NA NA
ALA V:99 V:226 9.0 0.078 -71.4 137.2 NA NA NA
ALA X:99 X:226 10.0 0.087 -71.2 137.1 NA NA NA
ALA Z:99 Z:226 10.0 0.087 -74.1 135.7 NA NA NA
ALA BA:99 b:226 9.0 0.078 -72.9 135.6 NA NA NA
1mq8 2 P20701 98.87 2e-117 X-RAY
 2003-01-14 ALA B:97 B:226 14.0 0.122 -110.3 144.8 14.0 0.122 0.0
ALA D:97 D:226 13.0 0.113 -110.5 144.8 NA NA NA
3bn3 1 P20701 98.32 2e-117 X-RAY
 2008-08-19 ALA A:99 A:226 12.0 0.104 -62.2 142.2 12.0 0.104 0.0 HOH
 3.744
 CB
 O
6bxb 1 P05106,P20701 99.44 4e-113 X-RAY
 2018-08-01 ALA A:208 A:208 13.0 0.113 -69.0 144.3 13.0 0.113 0.0 GOL
HOH
 3.248
7.372
 CB
CB
 O1
O
ALA B:208 B:208 11.0 0.096 -93.2 149.9 NA NA NA
6ckb 1 P05106,P20701 99.44 4e-113 X-RAY
 2018-08-01 ALA A:208 A:208 11.0 0.096 -69.1 139.5 11.0 0.096 0.0
ALA B:208 B:208 22.0 0.191 -69.7 140.9 NA NA NA
6bxf 1 P05106,P20701 99.44 5e-113 X-RAY
 2018-08-01 ALA A:208 A:208 11.0 0.096 -74.0 150.8 11.0 0.096 0.0
ALA B:208 B:208 10.0 0.087 -69.5 127.2 NA NA NA
6bxj 1 P05106,P20701 99.44 8e-112 X-RAY
 2018-10-03 ALA A:208 A:208 13.0 0.113 -67.2 140.9 13.0 0.113 0.0 HOH
 3.424
 CB
 O
1t0p 1 P20701 98.28 3e-111 X-RAY
 2005-03-08 ALA A:100 A:226 12.0 0.104 -64.9 147.6 12.0 0.104 0.0 HOH
 3.514
 CB
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p20701-f1 1 P20701 100.0 0.0 ALA A:251 A:251 7.0 0.061 -66.4 139.2