Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr16 | 55862840 | . | T | A | CCDS32450.1:NM_001025195.1:c.99aaA>aaT_NP_001020366.1:p.33K>N | Homo sapiens carboxylesterase 1 (CES1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1mx1 | 1 | P23141 | 99.82 | 0.0 |
X-RAY |
2003-04-22 | LYS | A:14 | A:1032 | 82.0 | 0.41 | E | -86.4 | 145.4 | 82.0 | 0.41 | 0.0 |
NAG SIA HOH |
9.952 9.059 3.031 |
O O N |
C8 O2 O |
||
LYS | B:14 | B:2032 | 84.0 | 0.42 | E | -76.2 | 142.2 | 84.0 | 0.42 | 0.0 |
SIA HOH |
8.004 3.125 |
O N |
C9 O |
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LYS | C:14 | C:3032 | 82.0 | 0.41 | E | -83.8 | 140.6 | 82.0 | 0.41 | 0.0 |
HOH |
2.875 |
N |
O |
|||||||||
LYS | D:14 | D:4032 | 85.0 | 0.425 | E | -78.2 | 145.4 | 85.0 | 0.425 | 0.0 |
SIA HOH |
7.607 3.112 |
O N |
O1A O |
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LYS | E:14 | E:5032 | 84.0 | 0.42 | E | -78.3 | 145.4 | 84.0 | 0.42 | 0.0 |
SIA HOH |
7.937 3.005 |
O N |
C11 O |
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LYS | F:14 | F:6032 | 88.0 | 0.44 | E | -82.2 | 150.0 | 88.0 | 0.44 | 0.0 |
HOH |
2.986 |
N |
O |
|||||||||
1mx5 | 1 | P23141 | 99.82 | 0.0 |
X-RAY |
2003-04-08 | LYS | A:14 | A:1032 | 89.0 | 0.445 | E | -74.6 | 141.8 | 89.0 | 0.445 | 0.0 |
SIA HOH |
9.180 2.881 |
O N |
N5 O |
||
LYS | B:14 | B:2032 | 85.0 | 0.425 | E | -78.5 | 142.0 | 85.0 | 0.425 | 0.0 |
SIA HOH |
9.155 2.869 |
O CG |
C11 O |
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LYS | C:14 | C:3032 | 86.0 | 0.43 | E | -89.4 | 136.5 | 86.0 | 0.43 | 0.0 |
HOH |
2.789 |
N |
O |
|||||||||
LYS | D:14 | D:4032 | 88.0 | 0.44 | E | -71.7 | 135.2 | NA | NA | NA | |||||||||||||
LYS | E:14 | E:5032 | 87.0 | 0.435 | E | -84.7 | 144.6 | NA | NA | NA | |||||||||||||
LYS | F:14 | F:6032 | 85.0 | 0.425 | E | -78.2 | 141.8 | NA | NA | NA | |||||||||||||
1mx9 | 1 | P23141 | 99.82 | 0.0 |
X-RAY |
2003-04-08 | LYS | A:14 | A:1032 | 90.0 | 0.45 | E | -72.6 | 146.7 | 90.0 | 0.45 | 0.0 |
HOH |
2.727 |
NZ |
O |
||
LYS | B:14 | B:2032 | 81.0 | 0.405 | E | -85.9 | 150.9 | 81.0 | 0.405 | 0.0 |
HOH |
2.910 |
NZ |
O |
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LYS | C:14 | C:3032 | 90.0 | 0.45 | E | -95.7 | 145.1 | 90.0 | 0.45 | 0.0 |
NAG HOH |
8.399 5.577 |
O N |
C8 O |
|||||||||
LYS | D:14 | D:4032 | 82.0 | 0.41 | E | -88.4 | 132.8 | 82.0 | 0.41 | 0.0 |
NAG HOH |
7.596 3.143 |
O N |
C8 O |
|||||||||
LYS | E:14 | E:5032 | 98.0 | 0.49 | E | -59.9 | 134.6 | 98.0 | 0.49 | 0.0 |
HOH |
7.711 |
O |
O |
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LYS | F:14 | F:6032 | 90.0 | 0.45 | E | -83.5 | 129.9 | 90.0 | 0.45 | 0.0 |
NAG HOH |
8.062 2.890 |
O N |
C8 O |
|||||||||
LYS | G:14 | G:1032 | 87.0 | 0.435 | E | -86.9 | 131.2 | NA | NA | NA | |||||||||||||
LYS | H:14 | H:2032 | 75.0 | 0.375 | E | -89.2 | 131.3 | NA | NA | NA | |||||||||||||
LYS | I:14 | I:3032 | 90.0 | 0.45 | E | -87.1 | 131.0 | NA | NA | NA | |||||||||||||
LYS | J:14 | J:4032 | 77.0 | 0.385 | E | -72.3 | 139.5 | NA | NA | NA | |||||||||||||
LYS | K:14 | K:5032 | 95.0 | 0.475 | E | -68.5 | 140.4 | NA | NA | NA | |||||||||||||
LYS | L:14 | L:6032 | 93.0 | 0.465 | E | -109.2 | 123.8 | NA | NA | NA | |||||||||||||
2dqy | 1 | P23141 | 99.82 | 0.0 |
X-RAY |
2006-08-29 | LYS | A:14 | A:1032 | 92.0 | 0.46 | E | -58.6 | 141.3 | 92.0 | 0.46 | 0.0 |
NAG SIA HOH |
9.987 7.296 2.853 |
O O N |
C1 O1B O |
||
LYS | B:14 | B:2032 | 92.0 | 0.46 | E | -60.1 | 142.2 | 92.0 | 0.46 | 0.0 |
NAG SIA HOH |
9.891 7.610 2.844 |
O O N |
C1 O1B O |
|||||||||
LYS | C:14 | C:3032 | 91.0 | 0.455 | E | -58.7 | 141.5 | 91.0 | 0.455 | 0.0 |
NAG SIA HOH |
9.707 8.334 2.856 |
O O NZ |
C1 O1B O |
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2dqz | 1 | P23141 | 99.82 | 0.0 |
X-RAY |
2006-08-29 | LYS | A:14 | A:1032 | 91.0 | 0.455 | E | -76.6 | 142.5 | 91.0 | 0.455 | 0.0 |
NAG SIA HOH |
9.473 8.521 2.967 |
O O N |
C1 O1B O |
||
LYS | B:14 | B:2032 | 88.0 | 0.44 | E | -74.6 | 144.1 | 88.0 | 0.44 | 0.0 |
NAG SIA HOH |
9.930 7.031 2.823 |
O O N |
C1 O1B O |
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LYS | C:14 | C:3032 | 94.0 | 0.47 | E | -78.5 | 138.9 | 94.0 | 0.47 | 0.0 |
SIA HOH |
7.344 2.839 |
O NZ |
O1B O |
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2dr0 | 1 | P23141 | 99.82 | 0.0 |
X-RAY |
2006-08-29 | LYS | A:14 | A:1032 | 89.0 | 0.445 | E | -75.9 | 142.5 | 89.0 | 0.445 | 0.0 |
NAG SIA HOH |
9.891 8.856 3.733 |
O O N |
C1 O1B O |
||
LYS | B:14 | B:2032 | 90.0 | 0.45 | E | -76.0 | 141.6 | 90.0 | 0.45 | 0.0 |
NAG SIA HOH |
9.682 7.006 2.743 |
O O NZ |
C1 O1B O |
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LYS | C:14 | C:3032 | 90.0 | 0.45 | E | -76.9 | 142.4 | 90.0 | 0.45 | 0.0 |
SIA HOH |
7.621 2.793 |
O N |
O1A O |
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2h7c | 1 | P23141 | 99.82 | 0.0 |
X-RAY |
2006-08-29 | LYS | A:14 | A:1032 | 91.0 | 0.455 | E | -82.4 | 144.8 | 91.0 | 0.455 | 0.0 |
HOH |
3.028 |
N |
O |
||
LYS | B:14 | B:2032 | 79.0 | 0.395 | E | -79.2 | 145.3 | 79.0 | 0.395 | 0.0 |
HOH |
3.135 |
N |
O |
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LYS | C:14 | C:3032 | 84.0 | 0.42 | E | -81.2 | 145.2 | 84.0 | 0.42 | 0.0 |
HOH |
3.106 |
N |
O |
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LYS | D:14 | D:4032 | 94.0 | 0.47 | E | -83.2 | 142.6 | 94.0 | 0.47 | 0.0 |
SIA HOH |
8.000 2.980 |
O N |
O10 O |
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LYS | E:14 | E:5032 | 83.0 | 0.415 | E | -78.9 | 146.0 | 83.0 | 0.415 | 0.0 |
NAG SIA HOH |
9.804 8.249 2.952 |
O O N |
C8 O1A O |
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LYS | F:14 | F:6032 | 81.0 | 0.405 | E | -81.8 | 145.5 | 81.0 | 0.405 | 0.0 |
NAG HOH |
9.467 3.038 |
O CB |
C8 O |
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1ya4 | 1 | P23141 | 99.81 | 0.0 |
X-RAY |
2005-08-02 | LYS | A:12 | A:32 | 94.0 | 0.47 | E | -80.3 | 141.5 | 94.0 | 0.47 | 0.0 |
NAG SIA HOH |
9.748 8.680 2.856 |
O O N |
O6 O1B O |
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LYS | B:12 | B:32 | 93.0 | 0.465 | E | -72.3 | 144.8 | 93.0 | 0.465 | 0.0 |
SIA HOH |
7.379 6.961 |
O O |
O1B O |
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LYS | C:12 | C:32 | 90.0 | 0.45 | E | -75.2 | 140.9 | 90.0 | 0.45 | 0.0 |
NAG SIA HOH |
9.927 7.623 2.488 |
O O N |
C1 O1B O |
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1ya8 | 1 | P23141 | 99.81 | 0.0 |
X-RAY |
2005-08-02 | LYS | A:12 | A:32 | 89.0 | 0.445 | E | -78.6 | 140.9 | 89.0 | 0.445 | 0.0 |
NAG SIA HOH |
9.700 7.689 3.467 |
O O N |
C1 O1B O |
||
LYS | B:12 | B:32 | 87.0 | 0.435 | E | -85.2 | 149.9 | 87.0 | 0.435 | 0.0 |
NAG SIA HOH |
9.881 7.329 9.215 |
O O O |
C1 O1B O |
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LYS | C:12 | C:32 | 86.0 | 0.43 | E | -92.0 | 140.9 | 86.0 | 0.43 | 0.0 |
NAG SIA HOH |
9.586 8.301 3.258 |
O O N |
C1 O1B O |
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1yah | 1 | P23141 | 99.81 | 0.0 |
X-RAY |
2005-08-02 | LYS | A:12 | A:32 | 89.0 | 0.445 | E | -78.0 | 147.4 | 89.0 | 0.445 | 0.0 |
NAG SIA HOH |
9.907 8.480 6.672 |
O O O |
O6 O1B O |
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LYS | B:12 | B:32 | 87.0 | 0.435 | E | -78.4 | 142.7 | 87.0 | 0.435 | 0.0 |
NAG SIA HOH |
9.874 8.014 3.450 |
O O N |
O7 O1B O |
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LYS | C:12 | C:32 | 88.0 | 0.44 | E | -81.8 | 142.2 | 88.0 | 0.44 | 0.0 |
SIA NAG HOH |
8.737 9.987 3.094 |
O O N |
O9 C1 O |
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1yaj | 1 | P23141 | 99.81 | 0.0 |
X-RAY |
2005-08-02 | LYS | A:12 | A:32 | 98.0 | 0.49 | E | -81.0 | 149.6 | 98.0 | 0.49 | 0.0 |
NAG SIA HOH |
9.984 8.554 2.709 |
O O NZ |
C1 C9 O |
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LYS | B:12 | B:32 | 100.0 | 0.5 | E | -84.0 | 121.6 | 100.0 | 0.5 | 0.0 |
NAG SIA |
9.795 7.753 |
O O |
C8 O1B |
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LYS | C:12 | C:32 | 94.0 | 0.47 | E | -74.6 | 143.4 | 94.0 | 0.47 | 0.0 |
SIA HOH |
8.708 3.591 |
O NZ |
O1B O |
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LYS | D:12 | D:32 | 95.0 | 0.475 | E | -72.2 | 151.9 | NA | NA | NA | |||||||||||||
LYS | E:12 | E:32 | 86.0 | 0.43 | E | -74.7 | 125.5 | NA | NA | NA | |||||||||||||
LYS | F:12 | F:32 | 94.0 | 0.47 | E | -75.1 | 142.5 | NA | NA | NA | |||||||||||||
LYS | G:12 | G:32 | 92.0 | 0.46 | E | -79.6 | 132.4 | NA | NA | NA | |||||||||||||
LYS | H:12 | H:32 | 98.0 | 0.49 | E | -58.6 | 141.6 | NA | NA | NA | |||||||||||||
LYS | I:12 | I:32 | 84.0 | 0.42 | E | -76.9 | 132.5 | NA | NA | NA | |||||||||||||
LYS | J:12 | J:32 | 98.0 | 0.49 | E | -91.6 | 135.7 | NA | NA | NA | |||||||||||||
LYS | K:12 | K:32 | 98.0 | 0.49 | E | -77.9 | 131.4 | NA | NA | NA | |||||||||||||
LYS | L:12 | L:32 | 91.0 | 0.455 | E | -90.4 | 133.1 | NA | NA | NA | |||||||||||||
2hrq | 1 | Q9UK77 | 99.81 | 0.0 |
X-RAY |
2007-05-01 | LYS | A:12 | A:1032 | 95.0 | 0.475 | E | -80.7 | 144.1 | 95.0 | 0.475 | 0.0 |
NAG SIA HOH |
9.732 7.591 2.775 |
O O NZ |
C6 C11 O |
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LYS | B:12 | B:2032 | 80.0 | 0.4 | E | -80.2 | 142.5 | 80.0 | 0.4 | 0.0 |
NAG SIA HOH |
8.954 7.783 3.133 |
O O N |
C1 O1B O |
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LYS | C:12 | C:3032 | 87.0 | 0.435 | E | -82.8 | 149.5 | 87.0 | 0.435 | 0.0 |
SIA HOH |
8.351 3.123 |
O N |
O1B O |
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LYS | D:12 | D:4032 | 89.0 | 0.445 | E | -87.7 | 147.1 | NA | NA | NA | |||||||||||||
LYS | E:12 | E:5032 | 87.0 | 0.435 | E | -84.2 | 143.8 | NA | NA | NA | |||||||||||||
LYS | F:12 | F:6032 | 98.0 | 0.49 | E | -73.4 | 151.0 | NA | NA | NA | |||||||||||||
2hrr | 1 | Q9UK77 | 99.81 | 0.0 |
X-RAY |
2007-05-01 | LYS | A:12 | A:1032 | 93.0 | 0.465 | E | -77.2 | 149.8 | 93.0 | 0.465 | 0.0 |
NAG SIA HOH |
9.394 8.771 3.049 |
O O N |
O6 O8 O |
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LYS | B:12 | B:2032 | 80.0 | 0.4 | E | -84.6 | 141.1 | 80.0 | 0.4 | 0.0 |
NAG SIA HOH |
9.186 7.508 3.141 |
O O N |
C1 O1B O |
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LYS | C:12 | C:3032 | 103.0 | 0.515 | E | -80.0 | 140.6 | 103.0 | 0.515 | 0.0 |
NAG SIA HOH |
9.541 7.358 2.629 |
O O NZ |
C8 O1A O |
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4ab1 | 1 | P23141 | 99.81 | 0.0 |
X-RAY |
2012-03-07 | LYS | A:12 | A:32 | 92.0 | 0.46 | E | -77.5 | 148.1 | 92.0 | 0.46 | 0.0 |
SCN HOH |
7.667 3.163 |
O N |
N O |
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5a7f | 1 | P23141-3 | 99.81 | 0.0 |
X-RAY |
2016-01-13 | LYS | A:12 | A:32 | 91.0 | 0.455 | E | -79.0 | 146.2 | 91.0 | 0.455 | 0.0 |
HOH |
3.151 |
N |
O |
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5a7g | 1 | P23141 | 99.62 | 0.0 |
X-RAY |
2016-01-13 | LYS | A:12 | A:32 | 84.0 | 0.42 | E | -82.0 | 143.4 | 84.0 | 0.42 | 0.0 |
HOH |
3.017 |
N |
O |
||
5a7h | 1 | P23141 | 99.62 | 0.0 |
X-RAY |
2016-01-13 | LYS | A:11 | A:32 | 86.0 | 0.43 | E | -81.6 | 144.7 | 86.0 | 0.43 | 0.0 |
IOD IOD HOH |
6.259 9.063 2.878 |
O O N |
I I O |
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3k9b | 1 | P23141 | 99.81 | 0.0 |
X-RAY |
2010-01-19 | LYS | A:9 | A:1032 | 87.0 | 0.435 | E | -89.7 | 141.7 | 87.0 | 0.435 | 0.0 |
HOH |
6.222 |
O |
O |
||
LYS | B:9 | B:2032 | 89.0 | 0.445 | E | -90.8 | 141.4 | 89.0 | 0.445 | 0.0 |
HOH |
7.534 |
N |
O |
|||||||||
LYS | C:9 | C:3032 | 90.0 | 0.45 | E | -90.7 | 142.1 | 90.0 | 0.45 | 0.0 |
HOH |
2.984 |
N |
O |
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1k4y | 1 | 3219695 | 82.06 | 0.0 |
X-RAY |
2002-05-01 | LYS | A:10 | A:32 | 95.0 | 0.475 | -81.8 | 146.7 | 95.0 | 0.475 | 0.0 |
NAG HOH |
9.936 2.721 |
O NZ |
C8 O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p23141-f1 | 1 | P23141 | 99.82 | 0.0 | LYS | A:32 | A:32 | 85.0 | 0.425 | E | -80.1 | 141.2 | |
af-q9uky3-f1 | 1 | Q9UKY3 | 93.63 | 3e-170 | LYS | A:33 | A:33 | 79.0 | 0.395 | E | -78.3 | 140.3 |