Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58742154 . T A CCDS10801.1:NM_002080.2:c.1214gAt>gTt_NP_002071.2:p.405D>V Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 ASP A:376 A:405 66.0 0.44 T -67.8 -22.3 66.0 0.44 0.0
ASP B:376 B:405 65.0 0.433 T -76.1 -12.0 NA NA NA
ASP C:376 C:405 65.0 0.433 T -74.2 -9.8 65.0 0.433 0.0
ASP D:376 D:405 66.0 0.44 T -77.6 -12.0 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 ASP A:376 A:405 79.0 0.527 T -78.5 -5.0 79.0 0.527 0.0 GOL
HOH
 7.764
2.702
 OD2
OD2
 O3
O
ASP B:376 B:405 82.0 0.547 T -75.8 -11.7 82.0 0.547 0.0 HOH
 3.050
 OD2
 O
ASP C:376 C:405 80.0 0.533 T -73.8 2.2 NA NA NA
ASP D:376 D:405 77.0 0.513 T -57.7 5.6 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ASP A:376 A:405 73.0 0.487 T -75.6 -2.2 73.0 0.487 0.0 GOL
KYN
HOH
 9.738
8.267
2.551
 O
OD2
OD2
 O2
O
O
ASP C:376 C:405 74.0 0.493 T -71.6 -10.2 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ASP B:376 B:405 74.0 0.493 T -74.7 -7.5 74.0 0.493 0.0 GOL
HOH
 7.640
2.762
 OD2
O
 O2
O
ASP D:376 D:405 80.0 0.533 T -64.8 -3.8 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 ASP A:376 A:405 79.0 0.527 T -73.6 -5.4 79.0 0.527 0.0 OAA
HOH
 9.142
2.399
 OD2
OD2
 O4
O
ASP C:376 C:405 80.0 0.533 T -82.2 3.3 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 ASP B:376 B:405 81.0 0.54 T -86.0 -2.3 81.0 0.54 0.0 BME
HOH
 8.936
2.818
 OD2
O
 S2
O
ASP D:376 D:405 77.0 0.513 T -75.7 -3.3 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ASP A:376 A:384 82.0 0.547 T -77.5 4.1 82.0 0.547 0.0 PLA
HOH
 8.608
2.428
 OD2
OD2
 OXT
O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 ASP A:376 A:376 79.0 0.527 T -94.8 1.9 79.0 0.527 0.0 CBA
HOH
 8.524
2.601
 OD2
OD2
 O
O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ASP A:376 A:384 86.0 0.573 T -91.8 8.7 86.0 0.573 0.0 KET
HOH
 8.659
2.302
 OD2
OD2
 O
O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ASP A:376 A:384 86.0 0.573 T -87.9 1.9 86.0 0.573 0.0 PGU
HOH
 8.529
2.562
 OD2
OD2
 O
O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ASP A:376 A:384 73.0 0.487 T -92.7 1.0 73.0 0.487 0.0 HOH
 2.563
 O
 O
ASP B:376 B:384 77.0 0.513 T -84.5 -1.2 77.0 0.513 0.0 HOH
 2.947
 OD2
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 ASP A:376 A:384 78.0 0.52 T -82.7 -0.1 78.0 0.52 0.0 HOH
 2.466
 OD2
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ASP A:376 A:384 78.0 0.52 T -73.9 1.8 78.0 0.52 0.0 HOH
 3.640
 C
 O
ASP B:376 B:384 81.0 0.54 T -84.8 -2.9 81.0 0.54 0.0 HOH
 2.842
 OD2
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ASP A:376 A:384 80.0 0.533 T -81.3 -5.9 80.0 0.533 0.0 PLA
 8.493
 OD2
 OXT
ASP B:376 B:384 75.0 0.5 T -95.6 8.7 75.0 0.5 0.0 PLA
 8.659
 OD2
 OXT
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 ASP A:376 A:384 76.0 0.507 T -92.1 10.1 76.0 0.507 0.0
ASP B:376 B:384 72.0 0.48 T -83.5 20.0 72.0 0.48 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ASP A:376 A:384 79.0 0.527 T -82.4 -1.9 79.0 0.527 0.0 HOH
 2.795
 OD2
 O
ASP B:376 B:384 72.0 0.48 T -84.9 0.5 72.0 0.48 0.0 HOH
 2.768
 O
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ASP A:376 A:384 78.0 0.52 T -83.4 -6.8 78.0 0.52 0.0 HOH
 2.920
 O
 O
ASP B:376 B:384 75.0 0.5 T -84.0 -1.8 75.0 0.5 0.0 HOH
 2.472
 O
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 ASP A:376 A:384 80.0 0.533 T -84.6 -1.8 80.0 0.533 0.0 HOH
 2.832
 O
 O
ASP B:376 B:384 76.0 0.507 T -86.8 -0.8 76.0 0.507 0.0 HOH
 2.728
 OD2
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ASP A:376 A:384 76.0 0.507 T -83.7 -1.6 76.0 0.507 0.0 HOH
 2.588
 O
 O
ASP B:376 B:384 80.0 0.533 T -79.1 -2.1 80.0 0.533 0.0 HOH
 2.914
 O
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ASP A:376 A:384 81.0 0.54 T -85.9 5.2 81.0 0.54 0.0 PPD
HOH
 8.457
2.493
 OD2
OD2
 OXT
O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 ASP A:376 A:384 83.0 0.553 T -76.6 -1.6 83.0 0.553 0.0 PPE
HOH
 8.594
2.667
 OD2
OD2
 OA
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 ASP A:405 A:405 77.0 0.513 T -79.4 1.8