Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr16 58743403 . T A CCDS10801.1:NM_002080.2:c.1088aAg>aTg_NP_002071.2:p.363K>M Homo sapiens glutamic-oxaloacetic transaminase 2 (GOT2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ax8 1 P00505 99.75 0.0 X-RAY
 2016-03-16 LYS A:334 A:363 111.0 0.555 H -66.1 -23.7 111.0 0.555 0.0
LYS B:334 B:363 147.0 0.735 H -75.1 -8.6 NA NA NA
LYS C:334 C:363 131.0 0.655 H -68.1 -37.8 131.0 0.655 0.0
LYS D:334 D:363 118.0 0.59 H -71.7 -15.6 NA NA NA
3hlm 1 P05202 95.26 0.0 X-RAY
 2010-06-02 LYS A:334 A:363 164.0 0.82 H -66.2 -48.3 164.0 0.82 0.0 HOH
 2.799
 NZ
 O
LYS B:334 B:363 150.0 0.75 H -70.7 -40.1 150.0 0.75 0.0 HOH
 2.963
 NZ
 O
LYS C:334 C:363 153.0 0.765 H -88.2 -50.0 NA NA NA
LYS D:334 D:363 164.0 0.82 T -100.2 -47.8 NA NA NA
3pd6 1 P05202 95.26 0.0 X-RAY
 2010-11-10 LYS A:334 A:363 151.0 0.755 H -52.7 -47.1 151.0 0.755 0.0 HOH
 2.674
 NZ
 O
LYS C:334 C:363 151.0 0.755 H -65.3 -46.1 NA NA NA
3pd6 2 P05202 95.26 0.0 X-RAY
 2010-11-10 LYS B:334 B:363 142.0 0.71 H -58.7 -67.4 142.0 0.71 0.0 HOH
 2.600
 NZ
 O
LYS D:334 D:363 144.0 0.72 H -56.3 -47.7 NA NA NA
3pdb 1 P05202 95.26 0.0 X-RAY
 2010-11-10 LYS A:334 A:363 144.0 0.72 H -64.7 -48.5 144.0 0.72 0.0 HOH
 3.355
 O
 O
LYS C:334 C:363 152.0 0.76 H -67.9 -53.5 NA NA NA
3pdb 2 P05202 95.26 0.0 X-RAY
 2010-11-10 LYS B:334 B:363 141.0 0.705 H -60.5 -62.8 141.0 0.705 0.0 HOH
 7.604
 CB
 O
LYS D:334 D:363 150.0 0.75 H -70.1 -53.8 NA NA NA
1ama 1 P00508 86.28 0.0 X-RAY
 1993-10-31 LYS A:334 A:342 145.0 0.725 H -66.0 -43.9 145.0 0.725 0.0 HOH
 2.674
 CE
 O
1ivr 1 P00508 86.28 0.0 X-RAY
 1997-07-23 LYS A:334 A:334 148.0 0.74 H -55.0 -47.6 148.0 0.74 0.0 HOH
 2.907
 CG
 O
1map 1 P00508 86.28 0.0 X-RAY
 1994-01-31 LYS A:334 A:342 144.0 0.72 H -58.4 -43.7 144.0 0.72 0.0 HOH
 2.601
 NZ
 O
1maq 1 P00508 86.28 0.0 X-RAY
 1994-01-31 LYS A:334 A:342 145.0 0.725 H -61.2 -44.1 145.0 0.725 0.0 HOH
 3.301
 CG
 O
1oxo 1 P00508 86.28 0.0 X-RAY
 1996-06-10 LYS A:334 A:342 135.0 0.675 H -64.7 -49.0 135.0 0.675 0.0 HOH
 2.477
 NZ
 O
LYS B:334 B:342 145.0 0.725 H -68.1 -54.8 145.0 0.725 0.0 HOH
 2.644
 NZ
 O
1oxp 1 P00508 86.28 0.0 X-RAY
 1996-06-10 LYS A:334 A:342 149.0 0.745 H -61.4 -42.5 149.0 0.745 0.0 HOH
 2.683
 CG
 O
1tar 1 P00508 86.28 0.0 X-RAY
 1994-01-31 LYS A:334 A:342 157.0 0.785 H -58.6 -43.6 157.0 0.785 0.0 HOH
 3.738
 CG
 O
LYS B:334 B:342 157.0 0.785 H -58.7 -49.5 157.0 0.785 0.0 HOH
 3.841
 CG
 O
1tas 1 P00508 86.28 0.0 X-RAY
 1994-01-31 LYS A:334 A:342 142.0 0.71 H -82.6 -39.9 142.0 0.71 0.0
LYS B:334 B:342 143.0 0.715 H -63.2 -47.6 143.0 0.715 0.0
1tat 1 P00508 86.28 0.0 X-RAY
 1994-01-31 LYS A:334 A:342 155.0 0.775 H -66.2 -55.4 155.0 0.775 0.0
LYS B:334 B:342 146.0 0.73 H -67.7 -50.1 146.0 0.73 0.0
7aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 LYS A:334 A:342 147.0 0.735 H -64.4 -45.5 147.0 0.735 0.0 HOH
 3.273
 NZ
 O
LYS B:334 B:342 145.0 0.725 H -70.7 -46.6 145.0 0.725 0.0 HOH
 3.128
 NZ
 O
8aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 LYS A:334 A:342 145.0 0.725 H -71.7 -50.3 145.0 0.725 0.0 HOH
 3.198
 CG
 O
LYS B:334 B:342 150.0 0.75 H -69.4 -55.1 150.0 0.75 0.0 HOH
 2.472
 NZ
 O
9aat 1 P00508 86.28 0.0 X-RAY
 1993-10-31 LYS A:334 A:342 147.0 0.735 H -78.8 -47.2 147.0 0.735 0.0 HOH
 2.937
 CG
 O
LYS B:334 B:342 151.0 0.755 H -66.8 -50.4 151.0 0.755 0.0 HOH
 3.857
 CG
 O
1aka 1 P00508 86.03 0.0 X-RAY
 1994-07-31 LYS A:334 A:342 148.0 0.74 H -72.2 -46.6 148.0 0.74 0.0 HOH
 2.814
 NZ
 O
LYS B:334 B:342 148.0 0.74 H -70.7 -45.7 148.0 0.74 0.0 HOH
 2.854
 NZ
 O
1akb 1 P00508 86.03 0.0 X-RAY
 1994-07-31 LYS A:334 A:342 141.0 0.705 H -58.2 -52.2 141.0 0.705 0.0 HOH
 3.163
 CG
 O
1akc 1 P00508 86.03 0.0 X-RAY
 1994-07-31 LYS A:334 A:342 146.0 0.73 H -69.2 -43.7 146.0 0.73 0.0 HOH
 3.362
 CG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p00505-f1 1 P00505 100.0 0.0 LYS A:363 A:363 154.0 0.77 H -65.3 -41.6